Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05803 ATGTTCTTTGACAGTCATAGGATTATTGCTATGTCAGTAGCACCAGCTGAGAGTATCGCCTCATTGAGTAGTGATCTCTTCTATGACATTCTCCGACGTCTTGATGGCCCTGCACTGGCTAGTGCAGCTTGTACTTGTGCAGCATTTTGTTCCATCTCAAAAGAAGAGAGTTTATGGGAAAATGTATGTTCATCTGTGTGGCCTTCAACCAATAGGGAGGATGTCAAAAGTTTAATATCCTCCATTGGTGGATTCAGAAAATTCTATGCAGATTGTTTTCCTCTTATTGTAAACAAGGAAGTTGGAGAGTATCAGTGGAACAACTACCTTGAGTACCCTGATGATTGGACTGAAGCTGAATATTATGGGGATATAAATGAATTTGAAAGCACCACTCCATCAGATTTTGTTTCCATTGTAGATATTAGGTTTAAGGAGAAACCAATCTGCTCCAAAGTTCTATGGGGAATTCCAAATGCAAATGGCCATGATGGTTGGTTTCATAACTGTCCTTTTCGGATTGATCTTCTAACTTATGCAGATAGAGATGATAACAATGATGGTGTGGTTACCCTTTCTGTATCTGATGGTTTGCCACCAATTACATCCATGGAAAGGGAAAGGAAAGATGGGAAGCTATGGAGGGAGCTTCATGGTGGTCTCTTGCTTAGTTGGATTATAGTAAACAAGAAAATAAAGCAAGCTGCTAATCTTGCTAGCTGGAGTCCTCTTGATGGGCAAAGACATTGGCCAACAGATAAGGATTTTGTGATTCGGTTTGGATCTGTTCTCCCTGCCAAGGAAATTCTTCCTTCTCAAGTAGTGCAGTGTATCCTTGTTATGAAGTTTAGAGTGGTTCACACAGAAGAAGAGGGGGTTCAAACAACTCTTAAATTGACAGAGTTGAGCATGCAGCTGGAAGACATGGAAGGTGCTCATGTTAATGGAAGGAACAGTTTGCTTATTCTTAAGGAAGCACTTAGCTGCCGAAGGAGCAAAAACTATAGTGAAGTACTTGAATCTTGTCACATGTACTCTAAAGTGCAAAATGAGTTGAGAGAGGAAAAGATGAGAAACGAAAGTAGGTTGGATACACTTTGTATTTTAAGTGGCATTGCTGCCTTTATGACATTCTGGTACTACATTTTGTGA 1152 0.4019 MFFDSHRIIAMSVAPAESIASLSSDLFYDILRRLDGPALASAACTCAAFCSISKEESLWENVCSSVWPSTNREDVKSLISSIGGFRKFYADCFPLIVNKEVGEYQWNNYLEYPDDWTEAEYYGDINEFESTTPSDFVSIVDIRFKEKPICSKVLWGIPNANGHDGWFHNCPFRIDLLTYADRDDNNDGVVTLSVSDGLPPITSMERERKDGKLWRELHGGLLLSWIIVNKKIKQAANLASWSPLDGQRHWPTDKDFVIRFGSVLPAKEILPSQVVQCILVMKFRVVHTEEEGVQTTLKLTELSMQLEDMEGAHVNGRNSLLILKEALSCRRSKNYSEVLESCHMYSKVQNELREEKMRNESRLDTLCILSGIAAFMTFWYYIL. 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05803 383 Gene3D - 10 116 - -
Seca8g05803 383 PANTHER F-BOX PROTEIN-RELATED 15 380 IPR045283 -
Seca8g05803 383 SUPERFAMILY F-box domain 17 93 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05803 Seca-Chr8 150709543 150710694 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05803 - - gmx:100779902 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05803 8 150709543 150710694 Seca8g05803 8 150709543 150710694 ECH
Seca8g05803 8 150709543 150710694 Seca8g06401 8 158308466 158311188 PCT