Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05782 ATGGAGCTCAGTAAAGTGACCCTAGAGATCTTCTCCAAACTGGAACAGAAATGGCTCTCTCACTGTTGTAAAGATACCAACAAAACCCGCATTCTCAGCATTGATGGCGGAGGAACCACCGCCATTGTCGCCGGCGCTGCTCTCATCCACCTCGAGGATCAGATCCGTCTCCAAACTTCCGATCCCCACGCTCAGATAGCAGATTTCTTCGAAATCGTCGCTGGTACAGGCATTGGCGCCATCCTTGCCGCCATGATCACCACCGCCGATGCCTTTGGCAGGCCACTCTATACTGCAAGAGAAGCCGTCCGTATCGTCACCGAGAGGAACTCCGAACTCTATAAGTTCAAAACCGCCGGAGTTTTTCGCCGGCGCCGGAGATTCTCCTCCAGGAGCATGGATAATGTGTTGAAGGAAGTGTTCCAGAGAAAGGAGGACGGACGGTTGTTGACATTGAAGGACACGTGTAAACCGCTGCTTATCCCTTGCTTTGACCTCAAGAGTTCGGCGCCGTTCGTCTTTTCTCGAGCTGATGCGTCCGAATCTCCAAGCTTCAACTTCGAGCTCTGGAAAGTATGCCGCGCCACATCGGCGACTCCGAGCCATTTCAAGCCCTTCCATTTCACTTCCGTCGACGGCAAGACCTCCTGCTCCGCCGTGGACGGCGGCCTGGTGATGAACAACCCTACGGCTGCGGCCGTCACGCACGTTCTCCACAACAAGCGTGATTTTCCGTCGGTGAACGGCGTGGAGGATCTCTTGGTCCTTTCCTTGGGCAACGGATCGTCGAGCGCGAAGACATGCGAGAGCCGGACGTGCTCCACGCCGACGGTGGTTGACATTGTGATCGACGGTGTTTCCGAGACCATTGACCAGATGTTGGGGAACGCCTTCTGTTGGAATCGTACGGACTACGTCAGAATCCAGGCGTTCGGTTTGGGAAGTGAAGCAATGAGGAAGGAGAGAGGGTCGGAAGAGGAGGTGCTGACAGAGAGGGGACTGGAGTCGTTACCGTTTGGCGGGAAGCGGTTAATGACGGAGACAAACGGTAACAGAATCGAAAGCTTCGTGCAACGTCTTGTTGCTACCGGAAAACTCAGTCCGCCGTCTAGTCCCTGCAAGGATTCCGCCGTTACCTCTCTCGCTAACGGCCGCTAA 1158 0.5509 MELSKVTLEIFSKLEQKWLSHCCKDTNKTRILSIDGGGTTAIVAGAALIHLEDQIRLQTSDPHAQIADFFEIVAGTGIGAILAAMITTADAFGRPLYTAREAVRIVTERNSELYKFKTAGVFRRRRRFSSRSMDNVLKEVFQRKEDGRLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFNFELWKVCRATSATPSHFKPFHFTSVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGSSSAKTCESRTCSTPTVVDIVIDGVSETIDQMLGNAFCWNRTDYVRIQAFGLGSEAMRKERGSEEEVLTERGLESLPFGGKRLMTETNGNRIESFVQRLVATGKLSPPSSPCKDSAVTSLANGR. 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05782 385 MobiDBLite consensus disorder prediction 365 385 - -
Seca8g05782 385 PANTHER PATATIN-LIKE PROTEIN 6 1 375 - -
Seca8g05782 385 MobiDBLite consensus disorder prediction 369 385 - -
Seca8g05782 385 Pfam Patatin-like phospholipase 32 233 IPR002641 GO:0006629
Seca8g05782 385 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 32 234 IPR002641 GO:0006629
Seca8g05782 385 Gene3D Cytosolic phospholipase A2 catalytic domain 19 368 - -
Seca8g05782 385 SUPERFAMILY FabD/lysophospholipase-like 27 311 IPR016035 -
Seca8g05782 385 CDD Pat17_PNPLA8_PNPLA9_like 31 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05782 Seca-Chr8 150136319 150138464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05782 1 385 Acyl Lipid Metabolism Gene Families AT3G63200 70.588 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05782 - - gmx:100777557 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05782 8 150136319 150138464 Seca8g05782 8 150136319 150138464 ECH
Seca8g05782 8 150136319 150138464 Seca2g04243 2 126798589 126800186 PCT