Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04243 ATGGAGCTCAGCAAAGTGACGCTAGAGATCTTCTCCAAACTGGAGCAGCAATGGCTCTCTCACTACGAAGCCACTGCCAAAACTCGCGTACTCAGCATTGACGGCGGAGGAACCACCGCCATTGTCGCCGGCGCTGCCCTCATCCACCTCGAGGACCAGATCCGCGCTCAAAGCTCCGATCCACACGCACAAATCGTCGATTACTTCGACATCATCGCCGGCACAGGCATTGGCGCGCTCCTCGCTGCCATGATCACCGCCGACGACGGCTTCGGCAGGCCTCTCTACACTGCTAGAGACGCCGTCAACCTCATCGCCGAGAGGAACAACGAACTCTACAAGCCAAAGTCCGTCGGAGTTTTTCGCCGGCGCCGGAGGCTCTCCTCTAGGAGCATGGAGAACGCATTGAAGGAAGTGTTCCAAAGGAAGGACGAAGAAGGACGTTCGTTGACGTTAAAGGACACGTATAAGCCCCTGCTTATCCCTTGCTTTGACCTCAAGAGTTCGGCGCCATTCGTGTTTTCCCGAGCGGACGCGTCCGAGTCACCGAGTTTCAACTTCGAGCTCTGGAAGGTTTGCCGCGCCACGTCAGCGACGCCAGGCCTCTTCAAGCCCTTCCACTTTGCCTCCGTCGACGGAAAGACCTCGTGCTCCGCCGTGGACGGCGGCCTAGTGATGAACAACCCTGCGGCGGCGGCGGTCACGCATGTCCTTCACAACAAGCGCGATTTCCCGTCGGTGAACGGCGTGGAGGATCTCCTGGTCTTGTCCATTGGAAACGGAGCGCCGGCGAAGAGAGTGCATGATGTCCGTGAGTGCTCGACGTCGTCGGTGGTTGACATTGCTCTCGACGGCGTTTCCGAGACCATTGACCAGATGCTAGGGAACGCATTCTGTTGGAACCGTACGGACTACGTCAGGATTCAGGTAGCGTTCGGTTTGGGAGGAGAGGGAACGAAGGAAGAAAAGGAGGTGCTAAATGAGAGAGTGCTGGAAACGTTACCGTTTGGCGGCAAGCGGTTACTGCAGGAAACAAACGGTAACAGAATCGAGAGCTTTGTGCAACGTCTTGTTGCTACCGGAAAGAGTAGCTTGCCACCTAGTCCTTGCAAGCTTCCGCCGTAA 1125 0.5698 MELSKVTLEIFSKLEQQWLSHYEATAKTRVLSIDGGGTTAIVAGAALIHLEDQIRAQSSDPHAQIVDYFDIIAGTGIGALLAAMITADDGFGRPLYTARDAVNLIAERNNELYKPKSVGVFRRRRRLSSRSMENALKEVFQRKDEEGRSLTLKDTYKPLLIPCFDLKSSAPFVFSRADASESPSFNFELWKVCRATSATPGLFKPFHFASVDGKTSCSAVDGGLVMNNPAAAAVTHVLHNKRDFPSVNGVEDLLVLSIGNGAPAKRVHDVRECSTSSVVDIALDGVSETIDQMLGNAFCWNRTDYVRIQVAFGLGGEGTKEEKEVLNERVLETLPFGGKRLLQETNGNRIESFVQRLVATGKSSLPPSPCKLPP. 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04243 374 Gene3D Cytosolic phospholipase A2 catalytic domain 18 365 - -
Seca2g04243 374 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 234 IPR002641 GO:0006629
Seca2g04243 374 PANTHER PATATIN-LIKE PROTEIN 6 1 371 - -
Seca2g04243 374 Pfam Patatin-like phospholipase 31 233 IPR002641 GO:0006629
Seca2g04243 374 SUPERFAMILY FabD/lysophospholipase-like 27 315 IPR016035 -
Seca2g04243 374 CDD Pat17_PNPLA8_PNPLA9_like 30 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04243 Seca-Chr2 126798589 126800186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04243 1 371 Acyl Lipid Metabolism Gene Families AT3G63200 69.496 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04243 - - gmx:100806989 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04243 2 126798589 126800186 Seca2g04243 2 126798589 126800186 ECH
Seca8g05782 8 150136319 150138464 Seca2g04243 2 126798589 126800186 PCT