Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05759 ATGAGAGATGAGAACTCGAAGAAAAGCAAGCTTTCATGGCCCAAAACGTTGGTCAAGAAGTGGTTCAATATTAAGAGCAAAGCTGAGGACTTTCAAGCAGATGATGTCCTTTATGGAGGTGTCGATGAAGAGTGGAGGAACAACTGTTCACAGAGGGAGGAATGCACTATTAAGAAAAGCAAAACAGAGAGAGCAAAGAGAAGGCACTCAGATAGAATGCGGCGAGGTAAAATTGATCTTGATGGAGCTCAGGTTACAGATGTGAATAATTATAGAGTCTTTGTTGCCACATGGAATGTAGCTGGAAAATCTCCTCCAAGTTATTTGAATCTGGAAGATTGGCTTCACACCTCTCCACCTGCTGATATCTATGTCCTTGGGTTTCAAGAAATTGTACCTCTCAATGCTGGTAATGTTTTGGGGACAGAAGACAATGGCCCTGCCAGAAAATGGCTAGCTCTTATTAGGAAGACACTTAACAGTCTTCCTGGAACAAGTGGTGAATGCCACACTACTTCACCACTGCCTGATCCTATTGTAGAGTTAGAAGATGATTTTGAGGGATCAATGAGGCAGAAGACAACCTCTTTCTTCCATCGCAGGTCGTTCCAATCCTTGAGTCATAGTATGAGAATGGACAATGACATGTCATTGCCACAAGCATGCCTTGATCGCCGTCTCAGCGTCTGTGATAGAATGATATTTGGTCACAGGACAAGTGACTATGACCCCAATTATAGATGGGCTTCCTCAGATGATGAAAATGGACCTGGTGACTCTCCAGGTATAACACAATATTCACCAATGACATATAGAGGTTGTTTCTCTATGGAGGACAGGGATAGACAGACAGAGCAATCAAGATATTGTTTGGTTGCTAGTAAGCAAATGGTTGGGATATTTCTAACAGTTTGGGTGAAAAGTAATATAAGAGATGATGTTCACAACTTGAAAGTGTCTTGTGTTGGTAGAGGCTTGATGGGATATCTTGGAAACAAGGGTTCAATATCAATTAGCATGTCTTTGCACAAAACAAGCTTTTGCTTCGTCTGTAGTCACTTGACATCTGGACAAAAGGAGGGTGATGAGCTAAGGAGAAATTCAGATGTAATGGAGATTCTCAGAAAGACAAGGTTTCCCCGGGTTCAAGGAAGGGGTGATGAGAATTTTCCTCAGACTATTCTGGAACATGATCGAGTAATTTGGCTGGGGGATTTAAATTATCGGATAGCCCTTTCTTACCGTGCAGCAAAAGCTCTTGTTGAGATGCATAATTGGAAGGTTTTGTTAGAGAATGACCAGCTGCAGATAGAGCGGGGACAAGGCCGTGTATTTGAAGGATGGCATGAGGGAAAAATATATTTCCCTCCCACATACAAGTATTCAAACAATTCAGACAGATATGCAGGCGATGAAAGACACTCGAAACAGAAGAGAAGAACTCCAGCATGGTGCGATCGAATCTTGTGGTATGGAAGAGGCCTCCACCAGTTATCTTATGTTCGTGGGGAGTCAAGATTTTCTGATCATAGACCAGTGTACAGTGTGTTCTTGGCAGAAGTTGAGTCTGTTAGCCGTAACCGAATCAAGAAATGCTCTAGTTGCTCCAGTTCAAGAATTGAAGTAGAAGAGTTGTTGCCGCATTCACATGGTTACAGCTACACAGATTTGAATTTCTTTTGA 1683 0.4231 MRDENSKKSKLSWPKTLVKKWFNIKSKAEDFQADDVLYGGVDEEWRNNCSQREECTIKKSKTERAKRRHSDRMRRGKIDLDGAQVTDVNNYRVFVATWNVAGKSPPSYLNLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRKTLNSLPGTSGECHTTSPLPDPIVELEDDFEGSMRQKTTSFFHRRSFQSLSHSMRMDNDMSLPQACLDRRLSVCDRMIFGHRTSDYDPNYRWASSDDENGPGDSPGITQYSPMTYRGCFSMEDRDRQTEQSRYCLVASKQMVGIFLTVWVKSNIRDDVHNLKVSCVGRGLMGYLGNKGSISISMSLHKTSFCFVCSHLTSGQKEGDELRRNSDVMEILRKTRFPRVQGRGDENFPQTILEHDRVIWLGDLNYRIALSYRAAKALVEMHNWKVLLENDQLQIERGQGRVFEGWHEGKIYFPPTYKYSNNSDRYAGDERHSKQKRRTPAWCDRILWYGRGLHQLSYVRGESRFSDHRPVYSVFLAEVESVSRNRIKKCSSCSSSRIEVEELLPHSHGYSYTDLNFF. 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05759 560 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 18 537 IPR045849 GO:0004445
Seca8g05759 560 Gene3D Endonuclease/exonuclease/phosphatase 259 545 IPR036691 -
Seca8g05759 560 Gene3D Endonuclease/exonuclease/phosphatase 70 207 IPR036691 -
Seca8g05759 560 FunFam Type IV inositol polyphosphate 5-phosphatase 7 259 545 - -
Seca8g05759 560 Pfam Endonuclease/Exonuclease/phosphatase family 96 510 IPR005135 GO:0003824
Seca8g05759 560 MobiDBLite consensus disorder prediction 246 267 - -
Seca8g05759 560 SMART i5p_5 225 525 IPR000300 GO:0016791|GO:0046856
Seca8g05759 560 SUPERFAMILY DNase I-like 80 534 IPR036691 -
Seca8g05759 560 FunFam type I inositol polyphosphate 5-phosphatase 4 isoform X1 71 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05759 Seca-Chr8 149920218 149925482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05759 285 527 Acyl Lipid Metabolism Gene Families AT2G43900 28.369 3.69e-29 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05759 - - gmx:100797409 1068.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05759 8 149920218 149925482 Seca8g05759 8 149920218 149925482 ECH
Seca8g05759 8 149920218 149925482 Seca2g04274 2 127253507 127259069 PCT