Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04274 ATGAAAGATGAGAACTCTAAGAAAAGCAAGCTTTCATGGCCAAAAACATTGGTCAAGAAGTGGTTCAATATCAAGAGCAAAGCTGAGGATTTTCAGGCAGATGATGTCCTTTGTGGAGGTGCTGATGAAGAGTGTAGGAGCAACTACTCAGAGAAGGAGGCATATACTATCAAGAAAAGCAAAACAGAGAAATCAAGTAGAAGGTACTCAGACAGAACGCGAAGAGGTAAGAATGATCTTGATGAAGCTCAGGATACAGATGTGTATAATTATAGAATATTTGTTGCCACTTGGAATGTGGCAGGGAAGTCACCTCCAAGTTATTTGAGTCTTGAAGATTGGCTTCATACCTCTCCACCTGCTGATATCTATGTTCTTGGGTTTCAAGAAATTGTGCCTCTTAATGCTGGTAATGTTTTGGGAACAGAAGACAATGGTCCTGCAAGAAAATGGCTAGCCCTTATAAGGAGGACCCTGAACAGCCTTCCTGGAACAAGTGGTGGATGCCACACTCCTTCTCCACTCCCTGCTCCTATTGTAGAGCTAGATGCTGATTTTGAGGGATCAATGAGACAGAAGGCAACCTCTTTCTTCCATAGGAGGTCCTTCCAAGCCTTGAGCCGTAGTATGAGAATGGATAATGACATGTCAATGCCACAACCTTCCCTTGATCGCCGTTTAAGTGTCTGTGATAGAATGATATTTGGTCATAGGATGAGTGACTATGACCCCAATTATAGATGGGGTTCATCTGATGATGAAAATGTAACTGGTGACTCCCCAATCACAACACAATATTCACCAATGTCATATGGCGGTTGTTTCTCAATGGAGGACAATGATAGACAGACAGGACACTCAAGATACTGCCTGGTTGCTAGTAAGCAAATGGTTGGAATATTTCTAACAGTTTGGGTAAAAAGTGATATAAGAGATTATGTTCACAACATGAAAGTGTCTTGTGTTGGCAGAGGATTAATGGGATATCTTGGAAACAAGGGATCAATATCAATTAGCATGTCATTGCACCAAACAAGCTTTTGCTTTGTCTGTAGTCATTTGACTTCTGGACAAAAGGATGGTGATGAGCTAAGGAGAAATTCAGATGTAATGGAGATTCTCAGAAAGACAAGGTTTCCCCAGGTCCATGACATGGGTGATGAGAATTCTCCTCAGACAATTCTGGAACATGATCGAATAGTTTGGCTGGGGGATTTAAATTATCGGATAGCCCTTTCTTACCGTGCAGCAAAAGCTCTTGTTGAGATGCATGATTGGAAGGGTTTGTTACAGAATGACCAGGCATGTTACTTTCTGTGTATAGAGCAAAGGCCAGGTCGAGTCTTTGAAGGATGGAATGAAGGGAAAATATATTTCCCTCCTACATATAAGTATTCAAACAATTCAGACAGATATGCAGGTGATGACAGACGCTCAAAACAAAAGAGAAGAACTCCAGCATGGTGTGATCGTATTTTGTGGTATGGAAGAGGACTCCACCAATTATCTTATGTTCGTGGGGAGTCAAGATTCTCTGATCATAGACCAGTTTATAGCATATTCTTGGCAGAAGTTGAGTCTATTAGCCATAACCAAATAAAAAGAGGCTCCAGTTCCAGGATTGAAGTAGAAGAATTGTTACCACATTCACATAGTTACAGCTATACTGATTTGAATTTCTTTTGA 1686 0.4093 MKDENSKKSKLSWPKTLVKKWFNIKSKAEDFQADDVLCGGADEECRSNYSEKEAYTIKKSKTEKSSRRYSDRTRRGKNDLDEAQDTDVYNYRIFVATWNVAGKSPPSYLSLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRRTLNSLPGTSGGCHTPSPLPAPIVELDADFEGSMRQKATSFFHRRSFQALSRSMRMDNDMSMPQPSLDRRLSVCDRMIFGHRMSDYDPNYRWGSSDDENVTGDSPITTQYSPMSYGGCFSMEDNDRQTGHSRYCLVASKQMVGIFLTVWVKSDIRDYVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFVCSHLTSGQKDGDELRRNSDVMEILRKTRFPQVHDMGDENSPQTILEHDRIVWLGDLNYRIALSYRAAKALVEMHDWKGLLQNDQACYFLCIEQRPGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDDRRSKQKRRTPAWCDRILWYGRGLHQLSYVRGESRFSDHRPVYSIFLAEVESISHNQIKRGSSSRIEVEELLPHSHSYSYTDLNFF. 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04274 561 Gene3D Endonuclease/exonuclease/phosphatase 222 547 IPR036691 -
Seca2g04274 561 Gene3D Endonuclease/exonuclease/phosphatase 72 206 IPR036691 -
Seca2g04274 561 SMART i5p_5 225 529 IPR000300 GO:0016791|GO:0046856
Seca2g04274 561 FunFam type I inositol polyphosphate 5-phosphatase 4 isoform X1 71 183 - -
Seca2g04274 561 Pfam Endonuclease/Exonuclease/phosphatase family 96 514 IPR005135 GO:0003824
Seca2g04274 561 FunFam Type IV inositol polyphosphate 5-phosphatase 7 259 546 - -
Seca2g04274 561 SUPERFAMILY DNase I-like 82 535 IPR036691 -
Seca2g04274 561 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 18 538 IPR045849 GO:0004445
Seca2g04274 561 MobiDBLite consensus disorder prediction 60 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04274 Seca-Chr2 127253507 127259069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04274 292 494 Acyl Lipid Metabolism Gene Families AT2G43900 30.396 3.72e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04274 - - gmx:100803074 1017.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04274 2 127253507 127259069 Seca2g04274 2 127253507 127259069 ECH
Seca8g05759 8 149920218 149925482 Seca2g04274 2 127253507 127259069 PCT