Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05754 ATGGCGACTCTGTCTCATGCAAATTCTAGGAGAATGTATTCATGGTGGTGGGACAGCCATATAAGCCCCAAGAACTCAAAATGGCTCCAAGAAAATCTGACAGATATGGATGCCAAGGTGAAGCAAATGATTAAGCTTATTGAAGAAGATGCAGATTCCTTTGCCAGGAGAGCAGAAATGTATTATAAAAAACGCCCAGAGCTTATGAAAATGGTTGAAGAGTTTTACCGGGCATATCGGGCATTGGCTGAGAGATATGATCATGCAACTGGAGTGATCCGCCAGGCTCATAGGACCATGGCTGAAGCATTTCCTAATCAAATCCCTATGATGCTGACAGATGATTTACCTGCAGTTTCTCCCACAGAGACTGAGCCACGTACTCCAGAAATGCGCCACCCTTCACGTGCATTTCTTGACCCAGATGGAGCTTATAATGAAGAGCCTAATTCTGCTTTGAACAAAACAGGTTTAAAACAGCTCAATGATCTCTACATCCCTGGAGAACATGAAAATCTTTCAAAGTTTGCAGAAGGGCATGCTAGAAGGGGGCTCAATTTTCTTGAGACACAGGAGGAGAGTAGTGAACTAAACAATGGAAGCCATGATACTAGGGCACAAGTCATGTCTGAGTCTGAACGTGTGACTAAAGCTGAGGCGGAAATTTTGGCCTTAAAGGAAGCCCTTGCCAAATTAGAAGGTGAAAAGGAAGTTGGCTTGCTTCAGTATCAGCAGAGTATGGAGAGATTGTCTAATCTTGAGTTTGAAGTGTCCTGCGCACGAGAGAATTCGCAAAGACTTGATGAACGAGCAAGTAAAGCAGAAGCTGAAGTTCAAGCCTTGAAGGAAGCCCTGATCAAATTACAGTCTGAAAGGGAAGCCAGTCTTCTTCAGTATCAGGAATGCTTGGAGAAAATATCTAATCTGGAGAAAATTATTTCTTTTGCTCAGAAGGATGCAGGAGAACTTAATGAACGAGCTACTAGAGCTGAAACTGAAGCTGAGTCCCTAAAGCAGGACCTTGCTAGAGCAGAAGCTGAAAAGGAAGCTGCCCTTGTTCAATATAAACAGTGCTTGGAGACATTATCAAAACTGGAGGAGAGATTAAAAGAAGCTGAGGAGAATGCTAGAAGGATCAATGAGCAAGCTAATATAGCTCAAAATGAAATTGAGGCTATGAAGTTGGAAATTACTAAACTTAATGAAGAGAATGATGATGCTGCTCTCCGTTATCAGCAATGCATGGAGATAATTTCCAGTTTGGAGTATAAACTCTCTTGTGCTGAAGAGGAGGTGCGTAGGCTAAATTCCAAGATAGATGATGAGGCTGAAAAGTTACATAGTTCCGAACAGAAGTGTCTTCTTTTGGAAACATCCAATCACACTCTGCAGTCTGAATTACAGTCTTTGGCACAGAAGATGGGGTCTCAAAATGAAGAGCTTAGTGAGAAGCAGAAGGAATTGGGTAGACTTTGGAATTGCATACAAGAGGAGAGATTGCGTTTCCTTGAGGCGGAAACTGCTTTCCAAACTCTTCAGCAATTGCATTCTCAATCTCAGGAAGACCTCAGATCTCTTGCTGCTGATCTTCACAATGTGGAATCACGCAAGCAGGCTTTAGAGGATGAAGTGCACCGGGTCAATGAGGAAAACAAAATTCTAAACGAGCTCAAAATTTCTTCATCTTTGTCTATAAAAAATTTGCAGGATGAGATATTGAGTTTGAAGGAGACCATAGAGAAACTTGAACAGGAGGTTGATATGCGTCTTGATGAAAGAAATGCTCTTCAGCAAGAAATTTACTGTCTTAAAGAGGAGCTTAATGATGTGAATAAAAAACATGAAGCTATGATGGAGGAGATCAGGTCAACCGACTTAGATCCACAGTGCTTTGGCTCATCTGTGAAAAAATTGCAAGATCAGAACTCAAAGCTGAAGGAGACATGTGAGGCTGACAAAGATGAGAAAGCAGCTCTTCTGGTAAAATTGGAAACCATGGGGAAACTTTTGGAGAAAAATTCTGTTTTAGAAAATTCCCTTTCAGATTTGAATGCTGAGCTGGATAGTGTCAGAGGAAAGGTGAATGTCTTGGAAGAAACATGCCAGTCTCTGCTTGTGGAGAAATCAACTCTTGCTGCTGAGAAGGCAACCTTGTTTTCTCAGTTACAAGCCACAACTGAAAAGCTGGAGAAGCTATCAGAAAAGAACAACCTTTTGGAAAATTCACTATTTGATGTGAATGCTGAACTTGAAGGATTGAGGGTAAAGTCCAAGACCTTAGAAGACAAATGCCAGTTACTTGACCATGAGAAGTCCAGTATCTTTTCAGAGAAAAAAACTTTAGTTTCGCAGTTGAATACCACTAATCAAGTGTTGAAAGATCTTGAAAAACAGCACAGTGAATTGGAACTCAAGCATTTGGAACTACAAGGAGATAGGGAGTCCGCACTTCAAAAGGTAGAAGAGCTACTGGTTTCCCTATATTCTGAGAGGGAAGAGCATTGCAGGGTTGTGAAATTGAATGAAGATGAATTGGCAAAGAGGGAATTACAAATTCATATTCTACAAGAAGATGCAAATTGCCAGAAAAAGGAATACGAGGAGGAACTGGACAGAGCTATACATGCTCAAATTGAAATTTTCATCTTGCAGAACTATATCCATGATTTGGAAAAAAATAACTTCTCCCTTCTAGTTGAGTGTCAGAGACTTTTGGAGGCATCCAAAATGTCCGAAAAAATGATATCTAAATTGGAGACAGAAAATGTTCAAAAGCAGGTTGATGTGAATTCTTTGTCTGAGAAAATTAGAATACTAAGGATTGGGCTGCTTCAGGTGTTGAAGACTCTTGACATTAACGGCGAGCATTTCTTTGAAGATATGCTTGACGAAGACCAGATTCTTCTAAACCATATACATGGAAAACTTCAGGAGAGACAGAATTCTTTTGACACAGTTTTCAATGAAAGCCAGCACACGGCCATTGAGAACTCAATTCTGATTACATTCCTTGGGCAATTGAAACTAATGGTTGAAAATCTTGTGACAGAAAGAGGTGCCCTTGATGAGGAGTACAGGATTCAGTCTAGGCAGTTCTTGGCATTGCAAATAGAGGTCCAAAAGATATTGGAGAAGAATCAGGAGTTGAAGTTGACAATAAGCAAAGGAGAAGAGAGAATGGAAGTAATGGCAGCTGAAATAGACAATCTTCGCAAACAGCTATCAGATTTGGAAAAGAGTCACAGCAACTTACAGGAAGAAAGGTGTGTGATATTTGAAGAGAAAAAGTCCTTGATGAGAAGATTTCTAGATCTGGATGAAGAGAAGAATAACTTGGAAGAAGAAATTGGTACCATGATCCATGAGACAATAGCTCAATCTAATATTTCTGTGATTTACCAGAATATTATCTTTGAAAAGCTCCTGGAACTTAAAGAGCTGGGTGAAGACCTTGATAAACTTTGTTCAGTAAATAATAACCTAGAGGAGAGATTAAAGATAATGGTGCACAAATTAGAAAATACAGAAATGGAAAATTCATATCTTAAAGAGTCATTTGTAAAGTCGAATGTTGAATTAAATTTAGTTGAATCTGTCAATGATCAATTGAGTTGTCAAATTAGGAGTGAAAGGGAAATGTTGTGTCAAAAGGAAAATGAGCTTTTGGAAGCAGCTGGGATGTTTCATGCTTTACACACAGAGAAAACAGAATTGCAAAGAATGGTGGAAGATCTGAAGATTAAGTATGATGAGGCCAGGGGAAAACTTGAAGAACAGGCTAATCAAATTTTCAAATTGTCCTCAGACAAGGATCGTCAAATTGAAGAGCTTGCATGCCTTTGTGAAGTGAATCAGAAGTTGGAGTCTGAAATGAAGCACCTACATCAAGAACTTGGAGAAACTAAACTGAGAGAAGAGAATCTAAGTTATGAAGTACAAAAGGGAATAAATGAGATTGAACAATGGGAAACTCAGGCTTCAACACTCTATGCCGAACTGCAGATTTCTGCTGTTAATGAAACATTATTTGAAGGGAAGGTCCATGAGCTAGCTGATACATGTGAGAATCTTGAACTCAAAAACTACTCCAAAAACATGGAAAGTGAACAGCTGAAAGAAATGGTTAGCAAGTTGGAAGGTGAAAATGGAAGACTGTCTGATCAATTAGCTGCTTATGGCCCGGCTGTCAGTGCTCTAAATGATTGTATAACATCCCTGGAGATGCAGACTCTTGTACATGCAAAACCCGATGACTATGAAGAATCAAAGGTTAAAAATTTGGTGAATCACCAACACACTGAAAACGGTGGACAAACCGTTGAAGATCAGACTGTTATGGTACCAGATGCAATCACTGACTTCCAAGACATGCAGAGAAGGATCAATGCAATTGCAATGGAAGTTAAGCAGTTAAGGGGAAGTTTCAAACCCAAGGATGAAATGAGAGAGGTTCAAGAGTTAAAATCTGGAATTAGCGGGCATCACGAGAATATTCAAACAAGCAAGTATGTTGGTCAAGTGGATGAAGCAAAGGAACACCGAGTTGCACCCACTAATGTAACAGAGATAGAGGTCTTGCCAAAAGACATCATGCTTGATCAAATATCTGAATGCTCATCATATGGGCTAAGTAGGAGAGAAACTCTTGAGGCTGATGATCAGATGCTTGAGTTGTGGGAAACAACTGATAAGGGTGGCATTATTAACCATCAAGTTGACAAGAAACAGAAGATGGCAGTGGGACAGGATGGCGATCATGAACGAGGATCAGCCAAGGAACCCAAAAATAAATATCCTTCAGAAGAGTCCTTGGTGAAGGAGTTGAGTGTGGACAAATTAGAGATCTCAAGAAGATTGACACAGCCACATGAAGAAGGCAATAAGAGCAAGATTTTAGAAAGACTTGATTCTGATGCACAGAAGTTAACAAACCTTCAAATAACAGTACAAGATTTGATGAAGAAGGTGGAAGCGACTGAGAAGAGCACAAAGGGAAAAGGTGGTGAGTATGATATGGCGAAAGGGCAGCTTGAAGCTGCTCAGGAGACCATCACAAAGTTGTTTGATGCCAACCGAAAGCTGATGAAGAATGTAGAAGAGGGTGCCTTGTCTTCTGTTGGGAAGGCTACAGCAGAGTCAGATGAGAGTGGAAGTGTCAGCAGAAGAAGAGTTTCAGAACAGGCACGTAGAGGATCAGAAAAAATAGGACAGCTTCAGTTGGAGGTGCAAAGACTGCAATTTTTTCTTCTGAAACTGGATGATGGAAAGGAAAATAAAGAGAAAACTACAATGGCTGGTCGAAGTCCAAGAGTACTTTTGCGGGATTACCTCTATGGTGGGACGAGAACAAACAACCAAAAGAAGAAGAAAAAAACACCTTTTTGTGCATGTGTGCGACCTCCCACCAAGGAAGATTGA 5418 0.4024 MATLSHANSRRMYSWWWDSHISPKNSKWLQENLTDMDAKVKQMIKLIEEDADSFARRAEMYYKKRPELMKMVEEFYRAYRALAERYDHATGVIRQAHRTMAEAFPNQIPMMLTDDLPAVSPTETEPRTPEMRHPSRAFLDPDGAYNEEPNSALNKTGLKQLNDLYIPGEHENLSKFAEGHARRGLNFLETQEESSELNNGSHDTRAQVMSESERVTKAEAEILALKEALAKLEGEKEVGLLQYQQSMERLSNLEFEVSCARENSQRLDERASKAEAEVQALKEALIKLQSEREASLLQYQECLEKISNLEKIISFAQKDAGELNERATRAETEAESLKQDLARAEAEKEAALVQYKQCLETLSKLEERLKEAEENARRINEQANIAQNEIEAMKLEITKLNEENDDAALRYQQCMEIISSLEYKLSCAEEEVRRLNSKIDDEAEKLHSSEQKCLLLETSNHTLQSELQSLAQKMGSQNEELSEKQKELGRLWNCIQEERLRFLEAETAFQTLQQLHSQSQEDLRSLAADLHNVESRKQALEDEVHRVNEENKILNELKISSSLSIKNLQDEILSLKETIEKLEQEVDMRLDERNALQQEIYCLKEELNDVNKKHEAMMEEIRSTDLDPQCFGSSVKKLQDQNSKLKETCEADKDEKAALLVKLETMGKLLEKNSVLENSLSDLNAELDSVRGKVNVLEETCQSLLVEKSTLAAEKATLFSQLQATTEKLEKLSEKNNLLENSLFDVNAELEGLRVKSKTLEDKCQLLDHEKSSIFSEKKTLVSQLNTTNQVLKDLEKQHSELELKHLELQGDRESALQKVEELLVSLYSEREEHCRVVKLNEDELAKRELQIHILQEDANCQKKEYEEELDRAIHAQIEIFILQNYIHDLEKNNFSLLVECQRLLEASKMSEKMISKLETENVQKQVDVNSLSEKIRILRIGLLQVLKTLDINGEHFFEDMLDEDQILLNHIHGKLQERQNSFDTVFNESQHTAIENSILITFLGQLKLMVENLVTERGALDEEYRIQSRQFLALQIEVQKILEKNQELKLTISKGEERMEVMAAEIDNLRKQLSDLEKSHSNLQEERCVIFEEKKSLMRRFLDLDEEKNNLEEEIGTMIHETIAQSNISVIYQNIIFEKLLELKELGEDLDKLCSVNNNLEERLKIMVHKLENTEMENSYLKESFVKSNVELNLVESVNDQLSCQIRSEREMLCQKENELLEAAGMFHALHTEKTELQRMVEDLKIKYDEARGKLEEQANQIFKLSSDKDRQIEELACLCEVNQKLESEMKHLHQELGETKLREENLSYEVQKGINEIEQWETQASTLYAELQISAVNETLFEGKVHELADTCENLELKNYSKNMESEQLKEMVSKLEGENGRLSDQLAAYGPAVSALNDCITSLEMQTLVHAKPDDYEESKVKNLVNHQHTENGGQTVEDQTVMVPDAITDFQDMQRRINAIAMEVKQLRGSFKPKDEMREVQELKSGISGHHENIQTSKYVGQVDEAKEHRVAPTNVTEIEVLPKDIMLDQISECSSYGLSRRETLEADDQMLELWETTDKGGIINHQVDKKQKMAVGQDGDHERGSAKEPKNKYPSEESLVKELSVDKLEISRRLTQPHEEGNKSKILERLDSDAQKLTNLQITVQDLMKKVEATEKSTKGKGGEYDMAKGQLEAAQETITKLFDANRKLMKNVEEGALSSVGKATAESDESGSVSRRRVSEQARRGSEKIGQLQLEVQRLQFFLLKLDDGKENKEKTTMAGRSPRVLLRDYLYGGTRTNNQKKKKKTPFCACVRPPTKED. 1806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05754 1805 Coils Coil 1368 1388 - -
Seca8g05754 1805 MobiDBLite consensus disorder prediction 1574 1603 - -
Seca8g05754 1805 Coils Coil 1642 1662 - -
Seca8g05754 1805 Coils Coil 418 452 - -
Seca8g05754 1805 Coils Coil 1039 1087 - -
Seca8g05754 1805 MobiDBLite consensus disorder prediction 1715 1730 - -
Seca8g05754 1805 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Seca8g05754 1805 Coils Coil 915 935 - -
Seca8g05754 1805 Coils Coil 215 235 - -
Seca8g05754 1805 PANTHER PROTEIN NETWORKED 4A 269 375 - -
Seca8g05754 1805 Coils Coil 460 487 - -
Seca8g05754 1805 Coils Coil 635 655 - -
Seca8g05754 1805 Coils Coil 523 557 - -
Seca8g05754 1805 Coils Coil 852 876 - -
Seca8g05754 1805 Coils Coil 1677 1697 - -
Seca8g05754 1805 Coils Coil 1235 1262 - -
Seca8g05754 1805 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Seca8g05754 1805 MobiDBLite consensus disorder prediction 1703 1732 - -
Seca8g05754 1805 Coils Coil 1095 1115 - -
Seca8g05754 1805 Coils Coil 250 410 - -
Seca8g05754 1805 Coils Coil 715 749 - -
Seca8g05754 1805 Coils Coil 565 624 - -
Seca8g05754 1805 Gene3D - 508 673 - -
Seca8g05754 1805 Gene3D - 294 455 - -
Seca8g05754 1805 Coils Coil 778 812 - -
Seca8g05754 1805 Coils Coil 1144 1178 - -
Seca8g05754 1805 Coils Coil 666 700 - -
Seca8g05754 1805 Coils Coil 1270 1304 - -
Seca8g05754 1805 SUPERFAMILY Tropomyosin 383 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05754 Seca-Chr8 149857790 149866123 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05754 - - gmx:100810726 2407.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05754 8 149857790 149866123 Seca8g05754 8 149857790 149866123 ECH
Seca8g05754 8 149857790 149866123 Seca2g04276 2 127307411 127314574 PCT