Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05748 ATGGAACCCAAGTTCACAATCAATTGTCACAGAAATGAGTTCCTTCCAACCAGTGGCACTAATTTGCCAGAGAGCCCCAGAATACCAATGGAGTTTCTTTCAAGGTCATGGAGTGCCTCTGCCCGTGAGGTCTCTAAAGCCCTAGCACCTCAACCACCTCTTCCTCCTTCTTCTTGCATAGCTTCCAAGCCTTCTAATGGATCCCCTTGTGTGAGTGTGACTAATACTATTCCTGAAGAAACTACTGGTCAGTCTGAGGAACTCTCCACCATGTTTGGGAATCAGTTCTCCTTCGCTTCCACTGCTACTTCACAGCTTGTCCTTGAGCGCATTATGTCACAGTCTGCAAGAGAGGAAGTGTCTCCATTAACTTCAGGTAGATTGTCTCACAGCAGTGAACCTTTGAACGGTGGTGGTTCTTTAACTGGAACAGATAGTCCACCAATTTCTCCTTCTGATGAGTTTGATGATGTTGTTAAGTTTTTTCGGGCAAACAATTCCATTTACCCCTTATTCAATGGTGGAAGAGCCATGAGTACTGCTACTGGCACTGGCAGTGCCACTCCTTGCTCCGGGCCTAAAACAGTTGGAAGATGGTTGAAAGACAGAAGAGAAAAAAAGAAAGAAGAAAACAGAAGCCATAATGCTCAACTGCATGCTGCTATTTCTGTAGCTGCGGTGGCTGCTGCAGTTGCAGCTATCACTGCTGCAACAGCAGCCTCATCTGCATCTAGCAAAGATGAGAGGATGGCTAAGACAGATATGGCTGTGGCTTCTGCAGCCACATTAGTTGCTGCTCAGTGTGTAGAAGCTGCTGAAGCAATGGGAGCTGAGCGAGACCACCTTGCTTCCGTGGTTAGCTCTGCTGTCAATGTCCGCTCTCATGATGATATCACAACGCTTACTGCTGCAGCTGCCACAGCTCTACGAGGGGCAGCAACCTTGAAAGCAAGAGCATTGAAGGAGATGTGGAATATTACTGCAGTGACACCACTAGAGAGAGGCATAGGGATAGGAATATGTGGTAAAGGCAATAACAATAATAGTAACTCTAGCACTAGTGATAGTGGGGAGATTATCAATGCAGAAAATTTTCTGGGTGCCTGCAGCCAAGAGCTGCTTGCCAGGGGCAGTGAATTACTCAAACGGACCCGTAAAGGTGATCTTCATTGGAAAATAGTTTCTCTTTACATACATCGAACAGGCCAGGTGATGCTGAAAATGAAGAGCAAACATGTTGCAGGAACCATTACCAAAAAGAAAAAGCATGTTGTGTTCGATGTATGCACGAATTTACCAGCATGGCCAGGAAGGCATCTGTTTGATGATGGTGAAAAAAGAAGGTATTTTGGATTGAAGACAGAATCAAGGGGGATTGTGGAGTTTGAATGTAGAAATCAAAGAGAATACGACATCTGGACTCAAGGGGTATCGAGACTTCTTTCCATTGTTGCACACAGGAAAAACAGAAATGGGATTTGA 1482 0.4534 MEPKFTINCHRNEFLPTSGTNLPESPRIPMEFLSRSWSASAREVSKALAPQPPLPPSSCIASKPSNGSPCVSVTNTIPEETTGQSEELSTMFGNQFSFASTATSQLVLERIMSQSAREEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISPSDEFDDVVKFFRANNSIYPLFNGGRAMSTATGTGSATPCSGPKTVGRWLKDRREKKKEENRSHNAQLHAAISVAAVAAAVAAITAATAASSASSKDERMAKTDMAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEMWNITAVTPLERGIGIGICGKGNNNNSNSSTSDSGEIINAENFLGACSQELLARGSELLKRTRKGDLHWKIVSLYIHRTGQVMLKMKSKHVAGTITKKKKHVVFDVCTNLPAWPGRHLFDDGEKRRYFGLKTESRGIVEFECRNQREYDIWTQGVSRLLSIVAHRKNRNGI. 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05748 493 PANTHER EXPRESSED PROTEIN 18 486 IPR040269 -
Seca8g05748 493 MobiDBLite consensus disorder prediction 181 214 - -
Seca8g05748 493 MobiDBLite consensus disorder prediction 197 214 - -
Seca8g05748 493 Pfam Plant pleckstrin homology-like region 379 484 IPR013666 -
Seca8g05748 493 MobiDBLite consensus disorder prediction 118 149 - -
Seca8g05748 493 MobiDBLite consensus disorder prediction 118 152 - -
Seca8g05748 493 Pfam Auxin canalisation 23 334 IPR008546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05748 Seca-Chr8 149785299 149789248 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05748 - - gmx:100782024 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05748 8 149785299 149789248 Seca8g05748 8 149785299 149789248 ECH
Seca8g05748 8 149785299 149789248 Seca2g04290 2 127437040 127440917 PCT