Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04290 ATGGAACCAAAGTGCACAATCAATTGTCGGCGGCCGGAGTATCTTCCAACCGGCGGCACACCTCTGCCGGAGAGTCCTCGAGTGCCAATGGAGTTTCTGTCAAGGTCATGGAGTGCCTCAGCTCTTGAGGTTTCCAAAGCTCTTGCACCTCATCAACCTCAACCTCAACCACAACCACCTCTTCCTTCATGCATGCCTTCTAAACCTGTAAATGGGTCCCATAGTGGGAGTACTACTAATTCTATTCCTGAAGAAACCGTTGGCCACTCTATCTTTGAGGAGTTCTCTAAGAATCAGTTCTCTTTCGCTTCCTCTGCTACCTCTCAGCTTGTCCTTGAGCGCATTATGTCACAGTCCATAAGAGAGGAAGTGTCGCCATTAACATCAGGTAGACTATCTCATAGCAGTGAGCCTTTGAACGGTGGTGGTTCATTAGCTGGAACAGATAGCCCTCCAATTTCACCTTCAGATGAATTTGACGATGTTGTTAAGTTTTTTCGAGCAAACAATTCCATTCACCCGTTATTCAATGGTGGACGAGCCAGTGCTGCTACTGGCAATGGCATGGCTTGCTCAGGACCTAAAAGTAAAACTGTTGGAAGATGGTTGAAAGACAGAAGAGAAAAGAAGAAAGAAGAAAACAGAACCCATAATGCTCAGCTGCACGCTACTATTTCAGTGGCTGCAGTGGCTTCATCTATAGCAGCCATTGCAGCTGCAACAGCAGCCTCATCTACACCCAACAAGGATGAGAAAATGGCCAAGACAGACATGGCTATTGCTTCTGCAGCCACATTAGTTGCAGCACAGTGTGTAGAGGCTGCTGAAGCAATGGGAGCTGAGCGTGACCACCTTGCTTCTGTGGTCAGCTCAGCTGTAAACGTCCGTTCTCATGATGATATCACTACTCTCACAGCTGCAGCTGCCACAGCACTAAGAGGAGCAGCAACCTTAAAAGCAAGAGCTCTAAAGGAAGTATGGAATATTCCTGCAGCAACACCACTAGAGAAAGGCATTGGGGGGATTGCAATACGTGGTAAAAGTAACAATAACAGCAACACCAGCAATACAAGCAACAGTGATAGTGGTGAAATTGTCAATGCAGAAAACTTTCTAGGTACCTGCAGCCAAGAGCTACTTGCTAAGGGCAGTGAATTACTCAAACGCACCCGTAAAGGTGATTTGCACTGGAAAATAGTTTCTGTTTACATACATCGAACAGGACAGGTAATGCTGAAAATGAAGAGCAGACATGTTGCCGGAACCATTACCAAAAAGAAAAAGAATGTAGTGTTCGACATATGTACGGATTTACCAGCATGGCCAGGGAGACATCTATTGGAGGATGGAGAAAAACGACGCTACTTCGGATTGAAAACAGAGTCAAGAGGGATGGTGGAATTCGAGTGTAGAAATCAAAGAGAATACGACATCTGGACTCAAGGCGTTTCGAGACTTCTCTCCATCGTTGCACAAAAACGACAAAACAGATACGACAACTGA 1503 0.4584 MEPKCTINCRRPEYLPTGGTPLPESPRVPMEFLSRSWSASALEVSKALAPHQPQPQPQPPLPSCMPSKPVNGSHSGSTTNSIPEETVGHSIFEEFSKNQFSFASSATSQLVLERIMSQSIREEVSPLTSGRLSHSSEPLNGGGSLAGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRASAATGNGMACSGPKSKTVGRWLKDRREKKKEENRTHNAQLHATISVAAVASSIAAIAAATAASSTPNKDEKMAKTDMAIASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNIPAATPLEKGIGGIAIRGKSNNNSNTSNTSNSDSGEIVNAENFLGTCSQELLAKGSELLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVFDICTDLPAWPGRHLLEDGEKRRYFGLKTESRGMVEFECRNQREYDIWTQGVSRLLSIVAQKRQNRYDN. 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04290 500 Pfam Plant pleckstrin homology-like region 385 490 IPR013666 -
Seca2g04290 500 MobiDBLite consensus disorder prediction 44 83 - -
Seca2g04290 500 PANTHER EXPRESSED PROTEIN 19 491 IPR040269 -
Seca2g04290 500 MobiDBLite consensus disorder prediction 343 362 - -
Seca2g04290 500 MobiDBLite consensus disorder prediction 123 151 - -
Seca2g04290 500 MobiDBLite consensus disorder prediction 123 157 - -
Seca2g04290 500 Pfam Auxin canalisation 23 338 IPR008546 -
Seca2g04290 500 MobiDBLite consensus disorder prediction 1 27 - -
Seca2g04290 500 MobiDBLite consensus disorder prediction 345 362 - -
Seca2g04290 500 MobiDBLite consensus disorder prediction 68 83 - -
Seca2g04290 500 MobiDBLite consensus disorder prediction 52 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04290 Seca-Chr2 127437040 127440917 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04290 - - gmx:100805743 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04290 2 127437040 127440917 Seca2g04290 2 127437040 127440917 ECH
Seca8g05748 8 149785299 149789248 Seca2g04290 2 127437040 127440917 PCT