Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05729 ATGGTTGCAAAAATGTTTGCACAGAGCATGAGTCCAACACTCACATTAGCTCATTGGAAGATGAGACGTAAACCAGAACACCCTTATGTAGTTGGAGTACTCACAAGGCCTACAGATAACCACATTTCAGGGGAAAAGGAAACATTAAGAAAAACCAATGTATACAAAGATAACTGGTTTGACAATTTGGCCATAAACCATTTATCAAAGAGCCTTCAAGCTGCAACAGGACTCAGTAATAGTAAGAGTGGATATGAGAGCCTTGTAGAGGCAGCTACAGTGGTTTCACAGAAATTCAATCCTATTCAACAACAAGAAGTTATCAATCAAGCACTTGACAGAGCCTTCCCAAAGCCAATACTTTCAATGATAAGGACACTGCTACCTTCATCTAAATTCACAAGGGAATATTTTGCCGTCTTCACCACTTTGTTCTTTGCTTGGTTAATTGGTCCCTCCGAGGTGAGAGAATCGGAGGTCAACGGGAGAAGAGAAAAAAATGTAGTCTACATAAAAAAATGCAGGTTTCTAGAAGAGACAAATTGTGTTGGAATGTGTACTAATCTCTGCAAAATGCCATCTCAATCATTTATTAAGGACTCTTTGGGTATGCCAGTCAACATGGTCCCTAGTAAGTATATATCCCCAGCAACTATTCATGAGCAAAAATGCATGGATAGGCAAAGTTCTACTTTTGCATACACCAATTTAATTTACTCTTTAGGATTGAATACTCAAATTAGTCCTGAAAGATAG 756 0.3849 MVAKMFAQSMSPTLTLAHWKMRRKPEHPYVVGVLTRPTDNHISGEKETLRKTNVYKDNWFDNLAINHLSKSLQAATGLSNSKSGYESLVEAATVVSQKFNPIQQQEVINQALDRAFPKPILSMIRTLLPSSKFTREYFAVFTTLFFAWLIGPSEVRESEVNGRREKNVVYIKKCRFLEETNCVGMCTNLCKMPSQSFIKDSLGMPVNMVPSKYISPATIHEQKCMDRQSSTFAYTNLIYSLGLNTQISPER. 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05729 251 PANTHER BETA-CAROTENE ISOMERASE D27 29 211 IPR038938 -
Seca8g05729 251 Pfam Beta-carotene isomerase D27-like, C-terminal 148 211 IPR025114 GO:0005506
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05729 Seca-Chr8 149525167 149530301 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05729 K17911 - gmx:100782912 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05729 8 149525167 149530301 Seca2g04307 2 127682291 127687548 PCT