Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04307 ATGCAAAATATGGAAGCAAATGTTTTAAGGCAGAACAGGATTTCAACACTAAATTCAGCTCACTGGAAGCTGATGATCAAACATAAACCTTCTGTGGTTGCAGTGCTCAGAAGGACTTCAGGTGACATTATAGCAGAAAGAACAAAAACCAATGATAACTGGTTTGATCGCTTAGCAATAAACCATCTATCAAAAAGCGTTCAAGCAGCTACAGGACTCAGTAACAGTAAGAGTGGATATGAGAGCCTGGTTGAGGCAGCTATTATGGCTAAACAGAAATTTAATCCTATCCAGCAGAGAGAGGTTGTCAATCAAGCTCTTCACAGAACCTTCCCAAAGCCAGTACTTTCATTGATAAAGGCACTGCTACCACCTTCTAAATTCGCAAGGGAGCATTTTGCCGCTTTCACCACTTTGTTCTTTGCTTGGTTAGTTGGGCCCTCAGAGGTGAGAGAATCAGAGGTCAACGGAAGAAGAGAAAAAAATGTTGTCTACATCAGAAAATGCAGGTTTTTAGAGGAAACTAATTGTGTAGGGATGTGTATCAATCTCTGCAAAATTCCATCTCAATCATTTATTAAGGACTCTCTGGGTATGCCAGTCAACATGGTGCCTAATTTTGATGACATGAGTTGTGAGATGATTTTTGGGCAGGATCCTCCAGCATCAACTGATGATCCAGCTCTGAAGCAACCATGCTATAGACTATGCAAGGCAAATAAAAAGCATGGAACAAACTGCCTCAGTTAA 750 0.408 MQNMEANVLRQNRISTLNSAHWKLMIKHKPSVVAVLRRTSGDIIAERTKTNDNWFDRLAINHLSKSVQAATGLSNSKSGYESLVEAAIMAKQKFNPIQQREVVNQALHRTFPKPVLSLIKALLPPSKFAREHFAAFTTLFFAWLVGPSEVRESEVNGRREKNVVYIRKCRFLEETNCVGMCINLCKIPSQSFIKDSLGMPVNMVPNFDDMSCEMIFGQDPPASTDDPALKQPCYRLCKANKKHGTNCLS. 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04307 249 Pfam Beta-carotene isomerase D27-like, C-terminal 143 223 IPR025114 GO:0005506
Seca2g04307 249 PANTHER BETA-CAROTENE ISOMERASE D27 20 247 IPR038938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04307 Seca-Chr2 127682291 127687548 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04307 K17911 - gmx:100782912 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05729 8 149525167 149530301 Seca2g04307 2 127682291 127687548 PCT