Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05727 ATGAAAATTCAGCCGATCGATTCTCAGATACCGGCGGAGGGGACTCGACTTGAGCTGGTCAAGCCGGTTGTCAAGTCACGATTGAAGCGGCTCCTCGAGCGCCCGTTCTCCGGCGTTCTGAGAAATTCGGCGGCGGAAAAGATCGGCGGCGGCCAGGAATCGCATTTATGCAAGGAAAACTTCAACGGCTCCACTGATTTCGAACCGAGTTCGGTATGTTTAGCGAAAATGGTGCAGAATTATCTTGAGGAGAATCACGAGAAGCACACTGCTCCCGTCAAGTGCGGACGCAACTGCTTCAATAGAAACTGTGACGATAGCTCCGACGACGAATCAGACGCGCATGGCGGTTTCGGCGACTCCAATTATTCTCCCGCTGAAGCGTCTGAAATCCTCAAGGGTTTGGTAGCTTGTGGGAGCGTTAGTGAGAGGAATTTACTAGCGGACACTGCGAAGATCGTTGATAAGAACAAGATCTGCAAGCGTAAAGATAATTTGTGCCGGAAGATTGTTACAGAAGGGTTGTTGGCTCTAGGATACGATGCTTCCATTTGCAAATCTCGCTGGGAAAAATCCCCCTATTACCCCGCCGGGGAATATGAGTACATAGATGTGGTGCTGGGGAATGAGAGAGTGTTAATTGATATTGACTTCAGGTCAGAATTCGAGATCGCTCGATCAACCAAGACTTACAAGACGATTCTCCGGAACCTTCCCTATATATTCGTTGGAAAGTGCGATCGGTTACAGAGCATCGTGGGTATCGTATCAGAGGCAGCGAAGCAGAGTCTGAAGAAGAAGGGAATGCACGTTCCGCCGTGGAGGAGAGCTGAATATGTCAAAGCGAAGTGGCTCTCCCCATATACGCGCGCTGCTGCTGCTGCCACTACTACGCCTGCGCCCCCAATCAAAGAAGAGACGAAAAAACAGCAGATTTTGAAGGAAAACTCAAACTCTGTCACTGATTCGGTTATTACTTTGTCCGGCGAAGGAGAGAAGGCGGTGGATGAATGGAAGCCACCGGAGCTGAAACCCAAGGGTTCACTTTCTGGGGTTAAGGTCGTGACTGGTTTAGCAATGGTGATTAATGATGATAACCCATAA 1104 0.4955 MKIQPIDSQIPAEGTRLELVKPVVKSRLKRLLERPFSGVLRNSAAEKIGGGQESHLCKENFNGSTDFEPSSVCLAKMVQNYLEENHEKHTAPVKCGRNCFNRNCDDSSDDESDAHGGFGDSNYSPAEASEILKGLVACGSVSERNLLADTAKIVDKNKICKRKDNLCRKIVTEGLLALGYDASICKSRWEKSPYYPAGEYEYIDVVLGNERVLIDIDFRSEFEIARSTKTYKTILRNLPYIFVGKCDRLQSIVGIVSEAAKQSLKKKGMHVPPWRRAEYVKAKWLSPYTRAAAAATTTPAPPIKEETKKQQILKENSNSVTDSVITLSGEGEKAVDEWKPPELKPKGSLSGVKVVTGLAMVINDDNP. 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05727 367 PANTHER OS03G0796600 PROTEIN 23 317 IPR006502 -
Seca8g05727 367 Pfam PDDEXK-like family of unknown function 76 290 IPR006502 -
Seca8g05727 367 NCBIfam uncharacterized plant-specific domain TIGR01615 168 291 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05727 Seca-Chr8 149472769 149474082 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05727 - - gmx:100781835 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05727 8 149472769 149474082 Seca8g05727 8 149472769 149474082 ECH
Seca8g05727 8 149472769 149474082 Seca2g04311 2 127721306 127723655 PCT