Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04311 ATGCCTTTCACGATGAAGATTCAACCGATCGATTCTCATGTATCTGAAGCAGAGGAGACTAGGCTTGAGCCGGTCAAGCCGGTTGTCAAGTCGCGGCTAAAGCGGCTCTTCGAACGCCAGTTCTCCGGCGTTCTGAGGATTTCAACGGCGGAGAAGATCAGCGGCGAAGATCCACATCACGGCTCTGTTGATGTCGAACCGAGCTCCGTGTGTCTGGCGAAAATGGTGCAGAGTTTCATGGAAGAGAATCACGAGAAGCACTCCGGTTCCGTCATGTCTGCACGTAACCGCTACAACTGCTTCAACGGGAACTCTGATGATAGCTCCGACGCCGAATCACATGCGCTTAGTGGTTTCGGTGACTCCACTAATTCTTCGTCCGGCGAAGCGTACGAAATACTCAAGGGTTTGGTGGCATGCACAAGTGTTTCTGAAAGGAATTTGCTAGCGGACACAACTAAGATCATTGAGAAGAATAAGACAGTGTGCAAGCGCAAAGATGATCTTTGTAGAAAGATCGTTACCGATGGCTTGGTGGCACTCGGATACGATGCTTCCATCTGCAAATCTCGCTGGGAAAAATCCCCCTTTTGTCCTGCCGGGGAATATGAATACATTGATGTGATGATAGGAAAGGAGCGGGTGATAGTTGATGTTGACTTCAGATCAGAATTCGAGATTGCTCGATCCACCAAGGCCTACAAGGTGATCCTCCAAACCCTTCCCTATGTATTCGTTGGCAAGTGTGATCGGCTACAGAGCATCGTGGCCATTGCATCGGAGGCGGCAAAGCAGAGTCTGAAGAAGAAGGGTTTGCATGTTCCGCCATGGAGAAAGGTGGAATACGTCACAGCAAAATGGCTTTCCCCTTACCTCAGAAAGGGAACGGAAGAAAAACAGCAGCTTTCTATGAGAAGTGGGGGTGGTGAGTCTGAACCGAGTCGCGCCGAGTTGGTTTTGGATGGCTCGGTGTTGACTCAGTCTGAGAGTTCCCGTGGTAAGTCAAAGGTGATGGGTCAATGGAAGCCGCCGGTGTTGAAGCACAAGAGTGGTTTGGCAGCTGTCTTCCGTGAAAACCCATGA 1083 0.5032 MPFTMKIQPIDSHVSEAEETRLEPVKPVVKSRLKRLFERQFSGVLRISTAEKISGEDPHHGSVDVEPSSVCLAKMVQSFMEENHEKHSGSVMSARNRYNCFNGNSDDSSDAESHALSGFGDSTNSSSGEAYEILKGLVACTSVSERNLLADTTKIIEKNKTVCKRKDDLCRKIVTDGLVALGYDASICKSRWEKSPFCPAGEYEYIDVMIGKERVIVDVDFRSEFEIARSTKAYKVILQTLPYVFVGKCDRLQSIVAIASEAAKQSLKKKGLHVPPWRKVEYVTAKWLSPYLRKGTEEKQQLSMRSGGGESEPSRAELVLDGSVLTQSESSRGKSKVMGQWKPPVLKHKSGLAAVFRENP. 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04311 360 PANTHER OS03G0796600 PROTEIN 28 326 IPR006502 -
Seca2g04311 360 MobiDBLite consensus disorder prediction 324 344 - -
Seca2g04311 360 NCBIfam uncharacterized plant-specific domain TIGR01615 171 294 IPR006502 -
Seca2g04311 360 Pfam PDDEXK-like family of unknown function 74 293 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04311 Seca-Chr2 127721306 127723655 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04311 - - gmx:100796711 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05727 8 149472769 149474082 Seca2g04311 2 127721306 127723655 PCT