Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05711 ATGGCTGCTTCAATCTCAAACACGCTCATCTCCTTGTCCAAAACACACGAAGCTACCTTCCGATCATCAACCCAAACCAGATTATTCTCAACACCACCATCCTCTCTCACCCAAAACCAAAAGTCAACAATAAAACTCATCGCACGCAACAACTCCTCCTTCTCATCAATCGGCGAGCTCGAGAGAGAACAACAAGAACATGAAGCAATGCATCACATATCCAGAAAAGCCAACTCAGAGGAACATCAGCGACTACCCAACGTGACAGACGTGTGGCGCGAAATCCACGGCGAGAACGACTGGGCCGGACTTCTGGACCCAATGGACCCTACCTTACGTCAGGAGCTGATCCGCTACGGCGAGATGGCCCAGGCCTGCTACGACGCCTTCGACTTCGATCCTTTCTCCAAGTACTGCGGGAGCTGCCGCTTCACGCGCCGCAACTTCTTCTCCTCCCTCGGCATGTCCCACCATGGCTACAACGTCACGCGCTACCTCTACGCTACCGCCAACATCAACCTCCCTAACTTCTTCAAGCAATCACGCTGGTCCAAGATGTGGAGCAAACACGCCAATTGGGCCGGATACGTCGCCGTTTCAGACGACACCACCACCAACCGTCTCGGGCGAAGGGACATCACCATCGCGTGGCGTGGCACTGTGACGCACCTCGAGTGGGTGGCTGACCTCATGGATTTCCTTAAACCAATCTCCTCTAACAGCATCCCATGCCCTGATCAAACCGTTAAGGTTGAGTCTGGGTTCTTGGAGCTTTACACTGACAAGGAACAAAACTGCGGTTACTGCAAGTACTCAGTGAGGGAACAAATTCTGACGGAGGTGAAGAGGCTGTTGGACATGTACTCTAATGAGGAACTGAGCATTACCATAACGGGGCACAGTTTGGGGAGTGCTTTGGCTATTTTGAGCGCTTATGATATTGTTGAAACGGGGTTGAATGTGATGGGAGATAGCCGTGCCGTTCCGGTTTGTGTGCTGTCGTTTTCGGGTCCGAGGGTTGGGAATGTGAGGTTTAAGGAGAGGTTGGAAACTCTCGGGGTGAAGGTGTTGAGGGTGGTGAACGTGCATGACGTGGTGCCTAAGTCGCCGGGGTTTCTGTTCAACGAACAGTCGCCGCCGTCGGTGATGAAGCTCGCGGAGGCTTTGCCGTGGAGTTATTCGCATGTTGGTGTGGAACTCGTGTTGGACCACAAGAACTCGCCGTTCCTGAATCCCAATGCAGATGCTGTCTGTGCCCATAACTTGGAGGCTCTTTTGCATTTGCTTGACGGATACCATGGAAAAGGTCAAAGATTCGTGCTAGCAAGTGGTAGGGACCCAGCTCTAGTGAACAAGGCCTGTGATTTCCTGAAAGACCATTACTTGGTTCCACCAAACTGGAGGCAAGATGAGAATAAAGGCATGATTAGGGGCAAAGATGGACGCTGGATGCAGCCTGAGCGACCAAAACTTGACGATCACCCTGAAGATATGCATCACCATCTCAGCCAACTAGGCCTGGCTTCATCTGATATTTGA 1539 0.5198 MAASISNTLISLSKTHEATFRSSTQTRLFSTPPSSLTQNQKSTIKLIARNNSSFSSIGELEREQQEHEAMHHISRKANSEEHQRLPNVTDVWREIHGENDWAGLLDPMDPTLRQELIRYGEMAQACYDAFDFDPFSKYCGSCRFTRRNFFSSLGMSHHGYNVTRYLYATANINLPNFFKQSRWSKMWSKHANWAGYVAVSDDTTTNRLGRRDITIAWRGTVTHLEWVADLMDFLKPISSNSIPCPDQTVKVESGFLELYTDKEQNCGYCKYSVREQILTEVKRLLDMYSNEELSITITGHSLGSALAILSAYDIVETGLNVMGDSRAVPVCVLSFSGPRVGNVRFKERLETLGVKVLRVVNVHDVVPKSPGFLFNEQSPPSVMKLAEALPWSYSHVGVELVLDHKNSPFLNPNADAVCAHNLEALLHLLDGYHGKGQRFVLASGRDPALVNKACDFLKDHYLVPPNWRQDENKGMIRGKDGRWMQPERPKLDDHPEDMHHHLSQLGLASSDI. 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05711 512 Pfam Lipase (class 3) 215 372 IPR002921 GO:0006629
Seca8g05711 512 Gene3D alpha/beta hydrolase 91 498 IPR029058 -
Seca8g05711 512 CDD Lipase_3 146 406 - -
Seca8g05711 512 MobiDBLite consensus disorder prediction 473 498 - -
Seca8g05711 512 FunFam Phospholipase A1-II 3 91 495 - -
Seca8g05711 512 SUPERFAMILY alpha/beta-Hydrolases 109 433 IPR029058 -
Seca8g05711 512 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 15 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05711 Seca-Chr8 148959288 148964311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05711 75 507 Acyl Lipid Metabolism Gene Families AT2G30550 68.721 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05711 - - gmx:100779676 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05711 8 148959288 148964311 Seca2g04323 2 127918069 127922500 PCT