Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04323 ATGGCCACATCAATCTCAAACATACTTATCGCCTTCCCCAAAACCCAGCAAGAGTCCACCTTCGGATCCAACCACCCTAAACTCCAAACACCACCGCCATTATCTCTAACACTAACCACAACAAAACCTACCCTTCAATGCAAGGCCACCAAAACAGACTCCTCCTCCTCCTTATCCTCAACCATCTCAGACCTCCAAACACAAGACTCTAAATTAAAACCGAACCAAGGTGTAGCCATAGTAGATGTATGGCGTAAGATCCACGGCGAAGACAACTGGGCCGGGCTTCTAGACCCGATGGACCCACTTTTGCGCTCCGAACTGATCCGCTACGGTGAGATGGCCCAAGCCTGCTACGACGCCTTCGACTTCGACCCTTACTCCAAGTACTGCGGCAGCTGCAGGTTTCCAGTCTCCAATTTCTTCGAGTCACTAGACTTGAACCACATCGGCTACACCGTGACGCGCTACCTCTACGCCACCGCGAACATCAACCTCCCCAACTTCTTCAAGAAGTCACGGTGGCCAGACAAGATGTGGAGCAAGCATGCCAACTGGGCAGGCTACGTGGCAGTCTCTGACGACGCTACAAGCAAGCGCCTCGGGCGGAGGGACATCGTGATTTCGTGGCGAGGAACCGTTACACACGTGGAATGGGTGGCTGACCTCATGAATTTCCTCAAACCGGTGTCCCCTGACATTCCTTGCCCCGACAAAGAGGTTAAGGTGGAAGCCGGTTTCTTAGACATGTACACGGACAAGGAAACAACGTGCGGGTACTGTAAGTACTCCGCGAGGGAACAGGTACTCGCGGAAGTGAGGCGGTTAGCGGAGAAGTACCCTGATGAGGAAGTGAGTGTTACGATGACGGGGCATAGTTTGGGGAGTGCACTTGCTATATTGAGTGCATATGACGTGGCAGAGAGTGGGTTGAACGTGCGTGGGGATGGGCGTGGGGTGCATGTTTCGGTGATTTCGTTTTCGGGGCCTAGAGTGGGGAACGTGAGGTTCAAGGAGAGGTTGGAGTCGAAGTTAGGGGTTAAGGTGTTGAGGGTTCATAACGCTCATGATATGGTGGCTAAGTCGCCGGGGTTTTTTATCAACGAGGGTTCGCCAGGGTGGTTGTTGAATCTGGCGAAGAACTTGACGTGGTGGTATACGCATGTTGGGGTGGACTTGGAGTTGGACCATAAGCAATCACCGTATCTGAATCCCAATGGGGATGGTACTTGTGCCCACAACTTGGAGGCCCACTTGCACTTGCTTGACGGATACCATGGGAGGAATCGTGAATTTGAGCCAACGAGTGGGAGGGACCTTGCTCTGGTGAACAAGGACTGTGACTTTCTGAAAGATGAGCACTCGGTGCCACCAAGGTGGAGGCAAGATTTGAACAAGAACATGATCAAAACAGATGGACGGTGGGTGTTAGCTGAGCGCAAAAAAATTGAAGATCACCCTGAAGATACTCATCACCATCTCACGCAGCTAGGCCTGGCTTCATCTGATACCTAG 1515 0.5221 MATSISNILIAFPKTQQESTFGSNHPKLQTPPPLSLTLTTTKPTLQCKATKTDSSSSLSSTISDLQTQDSKLKPNQGVAIVDVWRKIHGEDNWAGLLDPMDPLLRSELIRYGEMAQACYDAFDFDPYSKYCGSCRFPVSNFFESLDLNHIGYTVTRYLYATANINLPNFFKKSRWPDKMWSKHANWAGYVAVSDDATSKRLGRRDIVISWRGTVTHVEWVADLMNFLKPVSPDIPCPDKEVKVEAGFLDMYTDKETTCGYCKYSAREQVLAEVRRLAEKYPDEEVSVTMTGHSLGSALAILSAYDVAESGLNVRGDGRGVHVSVISFSGPRVGNVRFKERLESKLGVKVLRVHNAHDMVAKSPGFFINEGSPGWLLNLAKNLTWWYTHVGVDLELDHKQSPYLNPNGDGTCAHNLEAHLHLLDGYHGRNREFEPTSGRDLALVNKDCDFLKDEHSVPPRWRQDLNKNMIKTDGRWVLAERKKIEDHPEDTHHHLTQLGLASSDT. 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04323 504 CDD Lipase_3 139 397 - -
Seca2g04323 504 SUPERFAMILY alpha/beta-Hydrolases 166 425 IPR029058 -
Seca2g04323 504 Gene3D alpha/beta hydrolase 83 490 IPR029058 -
Seca2g04323 504 FunFam Phospholipase A1-II 3 83 487 - -
Seca2g04323 504 Pfam Lipase (class 3) 207 365 IPR002921 GO:0006629
Seca2g04323 504 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 36 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04323 Seca-Chr2 127918069 127922500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04323 51 499 Acyl Lipid Metabolism Gene Families AT2G30550 60.307 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04323 - - gmx:100815007 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05711 8 148959288 148964311 Seca2g04323 2 127918069 127922500 PCT