Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05708 ATGGCTGAAGATACAAATATACATGCTTATTCACATAGATTGTCAAAGGACAATATTGAAGTGCCAAATAAGCAATCTAGTCGAAAAGCAGCCCGTCATCGTATTTTAAACCCTCAATCTCATAAAGTTAAAAATCAGAAGGTTCAAGAGATTAAGGATCAAATTGTTTTAGCTAAAGCATACTTGAATTTTGCACCGCCAAGCAACAACTCACGCTTGAAGGAGCTGGAGCTGCAAATGAAAGAGATGGAACAAGCAATTGGAGAAGCGACCCAGGATTCAGATTTGTCAAGCAGTGTTTTGCAGAAAATGAGACACATGGAGGCTTCACTGTCTAAAATCAGCCGTGCTTTCCCAGACTGCTCTGCTATGGCTGCTAAGCTTCAGGCGATGAAGCGTAACACTGAAGAGCAAGTCCGTTCTCTGCGAAATGAAGCAACATATCTTGTTCATCTTGCTGGAAGTACTGCCCCAAAAGGCCTTCATTGTCTTTCTATGCGGCTGACTGCAGATTACTTTTCCCTGAGGCCTGAGGAGAGAAAGCTTCCAAATGAAAATAAGATTCATAGTCCAGAACTTTATCATTATGCTGTCTTCTCTGACAATGTTCTCGCGTGTGCAGTGGTTGTGAACTCTACCATCTCTACTGCCAAGGAACAGGAGAAACTTGTTTTCCATATAGTGACCCATTCACTCAACTTACCAGCGATCTCAATGTGGTTCTTAATAAACCCTCCTGGCAAAGCCACAGTCCACATACATAGCATAGACAACCTCGAATGGTTGTCCAAATACAATACCTTCAGTAAAAATAATTCCAGTTATCCAAGATACATTTCTGAATTAAACTCCCTGCTTTTCTACCTGCCGGACATTTTCCCTGCCCTAAATAAGATTGTGCTCTTTGATCATGATGTGGTGGTGCAACAAGATCTCAGTGGACTATGGAATGCCAATATGAAAGGAAACATAATTGGAGCAGTTGGAACTTGTCAGGAAGGCAAAATCCCATTTCATAGGATTGATATGTTTATTAACTTCTCAGACCCATTTATTGGAGAGAGTTTTGATACCAATGCTTGCACGTGGGCATTTGGGATGAACATATTCGATTTGCAACAGTGGAGGAGACATAATTTAACTGCTGTCTATCACAAATATTTGCAAATGGGTTTTGAGAAGCCGTTGTGGAATTGGAATGTGGGACGTCTGCCTTTAGGCTGGCTCACCTTCTATAACAAGACGGAGGTGTTGGACAATCGATGGCACGTTCTTGGCCTTGGTCAATACTCGGGTGTTGATCGAAATGAGATTGAGCGGGCTGCTGTTATACACTATGATGGGATTAGGAAGCCATGGTTGGATATTGCAATGGGCAGATATAAAAGTTATTGGACCAAATTTTTGAATTTTGACCTTCCTTTTTTGCAACAATGCAATCTCGAGGCATGGTTCAAAATCCAAAATTTGTGTCTACCTGGACCTGGCTTTTGTATACAAGTTAGATTGCACATTCATCGCTTGATTCTCTTTATTCTTTAG 1542 0.4118 MAEDTNIHAYSHRLSKDNIEVPNKQSSRKAARHRILNPQSHKVKNQKVQEIKDQIVLAKAYLNFAPPSNNSRLKELELQMKEMEQAIGEATQDSDLSSSVLQKMRHMEASLSKISRAFPDCSAMAAKLQAMKRNTEEQVRSLRNEATYLVHLAGSTAPKGLHCLSMRLTADYFSLRPEERKLPNENKIHSPELYHYAVFSDNVLACAVVVNSTISTAKEQEKLVFHIVTHSLNLPAISMWFLINPPGKATVHIHSIDNLEWLSKYNTFSKNNSSYPRYISELNSLLFYLPDIFPALNKIVLFDHDVVVQQDLSGLWNANMKGNIIGAVGTCQEGKIPFHRIDMFINFSDPFIGESFDTNACTWAFGMNIFDLQQWRRHNLTAVYHKYLQMGFEKPLWNWNVGRLPLGWLTFYNKTEVLDNRWHVLGLGQYSGVDRNEIERAAVIHYDGIRKPWLDIAMGRYKSYWTKFLNFDLPFLQQCNLEAWFKIQNLCLPGPGFCIQVRLHIHRLILFIL. 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05708 513 Coils Coil 73 93 - -
Seca8g05708 513 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 271 481 IPR029993 GO:0047262
Seca8g05708 513 Coils Coil 125 145 - -
Seca8g05708 513 SUPERFAMILY Nucleotide-diphospho-sugar transferases 194 481 IPR029044 -
Seca8g05708 513 Pfam Glycosyl transferase family 8 163 457 IPR002495 GO:0016757
Seca8g05708 513 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 196 472 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05708 Seca-Chr8 148935649 148940533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05708 39 483 Glycosyltransferase AT1G06780 55.580 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05708 K13648 - gmx:100793193 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05708 8 148935649 148940533 Seca2g04325 2 127934986 127941285 PCT