Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04325 ATGTTAAATGCTATAGAACAGGAAGGCGTCGGAGAATTAGAAGGGCCAAAGGAAGTTGTTTATAAAGAAAAAGATTTTGGTTCAACATCTAGTTACAGTTCGGATAAGATTAATGGTTCTGAGGAATCTAAAATTGAGGGTTTCAGAAATAACCTCTTGGAAAGAAATGAATTTGATCATAACAAAAGACAAGACCAGGAAGCTCAGCAGAAAAGATTATCCTCGGTGGATGGAGATAAGATTTATTTGCAGAAGAAATTTAATACAACAGTTACACACAATCAGAATGTACAAACATATTCTCAAAGAATGACAGATAAGCAATCTGGTCTAACAGCAAGGCAACATCATCAAAGCCCTCAGACTCGGAGAGTGACAAATCAGAGGGTTGAGGAGATTAAGGATCAAATTATTAGAGCCAGAGCATACTTGGGCTTTGCCCCACCAAGCAGCAACTCACACTTGGTGAAGGAGTTGAAGCTGAGAATTAAAGAGATGGAGCGTGCAGTTGGAGAAGCTAGCAAGGATTCAGATCTGTCAAGGAGTGTTTTGCAGAAAATGAGACACATGGAGGCTTCACTGGCTAAAGCCAACCGTGCTTTCCCTGATTGCACTGCTATGGCTGCTAAGCTCCGTGCAATGAATCATAATGCTGAAGATCAAGTTCGTTCTCAGCAACATGAAGTAACATATCTTGTTCATCTTGCTGCAAGGACCACCCCGAAAGGGATTCACTGTCTTTCTATGCAGCTAACTGCTGATTACTTTGCCCTGAGACCTGAGGATAGGAAACTGCCAAATGAAAATAAGATTCATGATCCAAAACTTTATCATTATGCTGTTTTCTCTGACAATGTTCTGGCATGTGCAGTAGTTGTTAACTCCACTGTCTCTAATGCCAAGAAACAGGAAAGAGTTGTTTTCCATGTAGTGACCAATTCTCTCAACTTCCCTGCAATCTCGATGTGGTTCTTATTAAACCCTCCTGGCAAAGCCACAGTCCATGTACAAAACATAGACAATTTTGAATGGTTGTCCAAGTACAATACATTCAAGAAACCTAATTCCAGTGATCCAAGATATGCTTCTGAATTGAACTACCTGCGTTTCTACCTGCCAGATATCTTCCCTGCCCTAAATAAGATTCTGCTCTTTGATCATGATGTGGTGGTGCAACAAGATCTCAGTGGACTTTGGGGTGTTAATATGAATGGAAAAGTAATTGCAGGAGTTGGGACTTGTCAAGAAGGTGAAAGTTCATTTCGCAGGATGGATATGTTCATAAACTTCTCAGATCCATTAATTGCAAAGAGGTTTGATGTCAATGCTTGCACATGGGCATTTGGAATGAACCTGTATGATTTGCAACAGTGGAGGAGACATAATTTAACTGCTGTCTATCACAAATATTTGCAAATGGGTTCAAAGATGCCATTGTTGCACAGTGGAAGTCTGCCTTTAGGCTGGCTCACCTTCTATAACAAGAATATGGTTTTGGACAGACGGTGGCACATTCTGGGCCTTGGTCATGACTCGGGCATCGATAGAAATGAGATTGAGCAAGCTGCCGTTATACACTACGATGGAATCAGGAAGCCGTGGTTGGATATTTCGATGGGAAGATATAAGGGTTATTGGTCCAAATTTTTGAAGTTTGACCACCCTATGTTGCAACGTTGCAATCTCCAGGCTTAG 1695 0.4106 MLNAIEQEGVGELEGPKEVVYKEKDFGSTSSYSSDKINGSEESKIEGFRNNLLERNEFDHNKRQDQEAQQKRLSSVDGDKIYLQKKFNTTVTHNQNVQTYSQRMTDKQSGLTARQHHQSPQTRRVTNQRVEEIKDQIIRARAYLGFAPPSSNSHLVKELKLRIKEMERAVGEASKDSDLSRSVLQKMRHMEASLAKANRAFPDCTAMAAKLRAMNHNAEDQVRSQQHEVTYLVHLAARTTPKGIHCLSMQLTADYFALRPEDRKLPNENKIHDPKLYHYAVFSDNVLACAVVVNSTVSNAKKQERVVFHVVTNSLNFPAISMWFLLNPPGKATVHVQNIDNFEWLSKYNTFKKPNSSDPRYASELNYLRFYLPDIFPALNKILLFDHDVVVQQDLSGLWGVNMNGKVIAGVGTCQEGESSFRRMDMFINFSDPLIAKRFDVNACTWAFGMNLYDLQQWRRHNLTAVYHKYLQMGSKMPLLHSGSLPLGWLTFYNKNMVLDRRWHILGLGHDSGIDRNEIEQAAVIHYDGIRKPWLDISMGRYKGYWSKFLKFDHPMLQRCNLQA. 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04325 564 Coils Coil 208 228 - -
Seca2g04325 564 MobiDBLite consensus disorder prediction 1 43 - -
Seca2g04325 564 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 354 562 IPR029993 GO:0047262
Seca2g04325 564 SUPERFAMILY Nucleotide-diphospho-sugar transferases 277 561 IPR029044 -
Seca2g04325 564 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 279 554 IPR029044 -
Seca2g04325 564 Pfam Glycosyl transferase family 8 246 537 IPR002495 GO:0016757
Seca2g04325 564 Coils Coil 156 176 - -
Seca2g04325 564 MobiDBLite consensus disorder prediction 106 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04325 Seca-Chr2 127934986 127941285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04325 2 564 Glycosyltransferase AT1G06780 50.265 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04325 K13648 - gmx:100811619 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04325 2 127934986 127941285 Seca2g04325 2 127934986 127941285 ECH
Seca8g05708 8 148935649 148940533 Seca2g04325 2 127934986 127941285 PCT