Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05658 ATGTTTATCAGGCCAAGAGATGCTAGTGCTTTTAGTATATTCAAATGGAAACGTCATGGTGAATCATCAGTGACAGCTGGTTTACTTCAGGATGTTCCCCCAGAGATTGAATTGTCTGATTATAGAAGGATCCCAAGTCCTGGTAGTGAGAGCCCTTCAGGGCTTCTTAATGGTGAGAGTGTAAATGTAGAACCAATTGTTGATTTGGATCTCTTCTTTGAAAGGCTTTACAGCTACTACTGTGAGAAAGGGCTCTGGTGCATCATCATAAAGTGGATTGTTGAACTTCTGAGTCTAGGGTTCACCATATGCTTTTCAGGATTTTTTTTACTATATGTTGATTGGAATGGACTCCGTAATGCAAAGTGTGGGATGGAAGCAGTTGAATCTGGAATGAAGCCCTGTGATCTTGCTAAAGAAGCTCTTCATCAACACCCTTTAACCCCGTTAACACTTAGCAAAGCTATTATTGTTGGATACTTGGGAATATTTTCTATCTATTGGATATTTTGCTTCTTGAGGTTCTTTGCTCAGCTAAAGGATACTCTGGAAATCCGACAGTTCTACTACAATAGTCTCCATGTTACTGATAATGAAATTCAAACCATGCCCTGGGCTAAAATTCTTGAAAAGGTTGTTCTGTTGCAAAGCTCACGACAACTCTGTGTAGTAAAAGATCTCACTGCTCATGACATGGTCATGAGGTTGATGCGGAAAGAGAACTACTTGATTGGAATGCTCAACAAGGGTGTGCTTGCTTTTCCCATATCTCAGTGGGTCCCAGGTGCTGGTCCTACAGTGAAATCTGGTACTGATGGAACGCAATATCGTCTAATACTAACCAAGACTCTTGAGTGGACTTTGAATTGGTGCATCCTGCAAAGCATGTTCGACCGGTGTAGGATGATGACTCAGATATCAAACTATCTGTTTGTTTATGCTTGA 945 0.4095 MFIRPRDASAFSIFKWKRHGESSVTAGLLQDVPPEIELSDYRRIPSPGSESPSGLLNGESVNVEPIVDLDLFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMEAVESGMKPCDLAKEALHQHPLTPLTLSKAIIVGYLGIFSIYWIFCFLRFFAQLKDTLEIRQFYYNSLHVTDNEIQTMPWAKILEKVVLLQSSRQLCVVKDLTAHDMVMRLMRKENYLIGMLNKGVLAFPISQWVPGAGPTVKSGTDGTQYRLILTKTLEWTLNWCILQSMFDRCRMMTQISNYLFVYA. 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05658 314 Pfam Autophagy protein ATG9 63 300 IPR007241 GO:0006914
Seca8g05658 314 PANTHER APG9 AUTOPHAGY 9 5 299 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05658 Seca-Chr8 148313710 148316372 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05658 K17907 - gmx:100779344 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05658 8 148313710 148316372 Seca8g05658 8 148313710 148316372 ECH
Seca8g05658 8 148313710 148316372 Seca2g04367 2 128601959 128607898 PCT