Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04367 ATGTTCAAATGGAAACAGCAAGGTGCATCATCTCTGACAACAGGTTTACTTCATGATGTTCGACCAGAGATTGAATTGTCTGACTATGGAAAGATCCCAAGTCCAGGAAGTGAGAGCCCTTCAGGACTTCTTAATGGTGAAAGCCTAAATGTGGAACCAATTGCTGATTTAGATCTCTTTTTTGAAAGACTTTACAGCTACTACTGTGGAAAGGGGCTATGGTGCATCATTATAAAGTGGATTGTTGAACTTCTAAGTCTGGGGTTCACCATATGTTTTTCAGGATTTTTTTTACTATATGTTGATTGGAATGGGCTCCGTAATGCGAAGTGTGGGATGGATGCAGTTGAATCAGGAATTAAGCCTTGTGATCTTGCTAAAGAAGCTCTTAATCAGCACCCTTTAACCCCACTAACACTTGTCAAAGCCATTATTGTTGGGTACTTGGGAATATTTTCCATCTATTGGATATTTTGCTTCTTGAGATTCTTTGCACAACTAAAGGATACTCTGGAAATTCGACAATTTTACTACAACAGTCTTCATGTCACAGACAATGAAATTCAAACCATGCCCTGGGCTACAATTGTTGACAAAGTTGTTTTGGTACAAAGTACTCGACAACTATGTGTGGTAAAGGATCTTTCTGCGCATGAAATCATCATGAGATTGATGCGGAAGGAGAACTACTTAATTGGAATGCTCAACAAAGGTGTGCTTGCTCTCCCGATTTCACAGTGGGTGCCAGGTGCTGGTCCTACAGTCAAATCTGATCCTAATGGAACACAGTATCGTTTAATACTTACCAAGACCCTTGAGTGGACTTTGAATTGGTGCATTCTGCAGAGCATGTTTGATCGAAACTTTTGTGTCAGAAGGGATTTTGTGACAAATCCAAAGACATTACAGAAAAGGCTCATGGTAGTTGGGTTTGTAATGCTTTTGCTTTCTCCGTTTCTTGTCATATTCATGCTGGTATATCTGTTTCTGAGGCATGCTGAACAATTTTATAAACACCCAAGCACGGCATCATCTCGAAGATGGTCAAATTTATCAAGGTGGATCTTTAGGGAATTCAATGAGGTGGACCATCTCTTCAGGCATCGGATTAATAACAGTGTATTGCATGCTTCTGATTATCTCAAGCAATTTCCTTCACCTATCATATCTATCATTGCAAAATTCATCTCTTTTGTAGCGGGTGGCTTTGCTGCAATACTGATCATCATTGCTTTTCTCGAAGAGTCTCTGCTAGAGGGCCATATATTTGGTCGAAACTTGTTTTGGTATGCTGCTGTTTTTGGAACTATAACTGCCATTAGCCGGGCTGCGATTGCAGATGAGTTACTGGTCTTAGACCCTGAGGGAGCAATATCTATGGTGGTTCAGCATACACATTATATGCCAAGGAGATGGCGTGGCAAAGAAAGTACTGAAACAGTCCGTGTTGAATTTGAAACCTTATTCCAGTATACTGGAATGATGTTACTTGAGGAGATGGCCTCAATTTTCCTCACTCCATATTTACTTATGTTTATTGTCCCAAAGGTCGTTTCTGTACTTGGGGATAACTTTATTTTTATGCCATCTAGTATAATGTATTCACTTTGCAACTTTTTCATTTTGCAGCGAGTTGATGATATCTTGCAGTTCATTATTGATTTCACCGTAAATGTTGAAGGTGTTGGGCATGTTTGCAGTTTTAGCACCTTTGATTTTCAAGAGCATGGAAACAGTCATTATGGTTCCCCATACAATGCACCTCGTAGCCGGAGGAGTTCCCAGGGGAAGATGGAGAAATCACTGTTGAGCTTTCAGAGTAGTTACCCATCATGGGAACCAAATGCTCAGGGGAAGCAGTTTTTGCTAAATCTTAGAACATTCAGAGAGCAAAAGTTACGATTACATGGAAACAGGCACACATTATCCCCTCCTAGAATGTGGAGGGGTAGTCCCAATATGGGAAGCAATGGAGACAGCAACAGGTTTATATCCAGGGCAATGCCATACAATACTTTTGTAACTGGCAATCACTTGGATTCATTGTGGTTGACTGAAGCCAACCAAAACAATCATCCCTATCTTCTTGATTGGTACTATACATCTCAACCTCATGACGCAACTTTAAGAGATGTTCCATTAGAACCTTATGGAGTAACAGAGGATCATTCCAGAGAGTATTGCATGCCCACCAACTTGACACAGAATGAAGCTGGGTACGAAGAATACTCAAATGAGTACCATGAGGATCGTGCTTCATCTCATCTCGGGGCTTCCACATCAGCTCCCATCTTCAGGGAAGGCCTTATTCAGGATCAAGATTATAATGAACTGCCCCACACTACCAGGAGTCATTGGTGGGCAAGAAGTCGGCCACAGGATGGACAGGCTCAGACAAGCTTTTTTGAGCCTCCAGATTTCAATCACCAAACAACATATCATTATTATGATAAGTTTTCTGATAAAGTGTCAGAGGATCAAGACCAAGAACAAGAACAACACTTTTACTGGAGAGATTACAACAAATTATCTAGAACAACATGCACAGATGACTTAGAGGCAGGTGAATTTAATCTTCATTTTGACGATATTTATAGCAGACCACCAGAAACTCCCACTGTAAATCCCAGCACTGCAAGCTTTTGA 2646 0.4078 MFKWKQQGASSLTTGLLHDVRPEIELSDYGKIPSPGSESPSGLLNGESLNVEPIADLDLFFERLYSYYCGKGLWCIIIKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMDAVESGIKPCDLAKEALNQHPLTPLTLVKAIIVGYLGIFSIYWIFCFLRFFAQLKDTLEIRQFYYNSLHVTDNEIQTMPWATIVDKVVLVQSTRQLCVVKDLSAHEIIMRLMRKENYLIGMLNKGVLALPISQWVPGAGPTVKSDPNGTQYRLILTKTLEWTLNWCILQSMFDRNFCVRRDFVTNPKTLQKRLMVVGFVMLLLSPFLVIFMLVYLFLRHAEQFYKHPSTASSRRWSNLSRWIFREFNEVDHLFRHRINNSVLHASDYLKQFPSPIISIIAKFISFVAGGFAAILIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAISRAAIADELLVLDPEGAISMVVQHTHYMPRRWRGKESTETVRVEFETLFQYTGMMLLEEMASIFLTPYLLMFIVPKVVSVLGDNFIFMPSSIMYSLCNFFILQRVDDILQFIIDFTVNVEGVGHVCSFSTFDFQEHGNSHYGSPYNAPRSRRSSQGKMEKSLLSFQSSYPSWEPNAQGKQFLLNLRTFREQKLRLHGNRHTLSPPRMWRGSPNMGSNGDSNRFISRAMPYNTFVTGNHLDSLWLTEANQNNHPYLLDWYYTSQPHDATLRDVPLEPYGVTEDHSREYCMPTNLTQNEAGYEEYSNEYHEDRASSHLGASTSAPIFREGLIQDQDYNELPHTTRSHWWARSRPQDGQAQTSFFEPPDFNHQTTYHYYDKFSDKVSEDQDQEQEQHFYWRDYNKLSRTTCTDDLEAGEFNLHFDDIYSRPPETPTVNPSTASF. 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04367 881 Pfam Autophagy protein ATG9 51 519 IPR007241 GO:0006914
Seca2g04367 881 PANTHER APG9 AUTOPHAGY 9 1 824 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04367 Seca-Chr2 128601959 128607898 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04367 K17907 - gmx:100777405 1408.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04367 2 128601959 128607898 Seca2g04367 2 128601959 128607898 ECH
Seca8g05658 8 148313710 148316372 Seca2g04367 2 128601959 128607898 PCT