Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05615 ATGTATTGTAATTTTTCAGATGATGGAACCTTTTATTTTGATGAGAAATTTGTTGGTGGACCTGAGCATTTGGGTTCTCTTTCAACGACTGCTTCAGTTGTTCGAGGGGTCACTGCATTTGCTGCTGTAACTTCTGGAAAAATAAATCTTCCAGGGGATAAAATATTGGGTTTAGCAAAATTTTTTCTGGGTATTGGAATCCCAGGAGATGCCAAGGACTTCTACAATCAAGTTGAATCATTATCTTTTCTAGAGAGCAACAGGATTTCCATCCCACTGATATTGTCACTTCCTGAAACAGTTTATTCATTGACCAAGAAAGGCCAGCTTAAGGTCAGGGTGAATACAGTGCTTGGTTCAGCTGCACCACCTCTGACAGTTAAGCTTGTCCAAGCTTTTAGCACGGGTGCAAAAGATTCAGCTGTTATTGACAGCAAGGAGCTTCAGTATAACGAAAAAAGTGGATTTCATTTCTTGGATTCTATCCCAAAGAATGTGGATGTGGGGACATATGTGTTTGTTTTTGAGATTTTGCTTCATGAATCTGACAGTGAAAAAGTTTACGCTACTGGAGGCCAAATTCATGTGCCAATATATGTAACTGGAATTATTAAAGTTGGCAATGCAGAAATTGCAGTTCTGGACAGTGATCTTGGAAGCATTGAAACCCAGAAAGCGCTAGATTTGGCTGGAAATGATGCTGTTTCACTCTCAGCTAACCACCTGCAGAAGTTGAGGCTTTCTTTCCAATTGGAATCTCCTCATGGTCATGTTTTTAAGCCTCATCAGGCATTTTTAAAGTTGAGACATGAGACAAAGATTGAGCACATCTTTTTGGTTGGGAATACCGGCAAGAAGTTTGAGATAATTCTTGATTTTCTTGGCTTGGTGGAGAAACTTTATTATCTCTCAGGCAGATATGACATTGAGCTGACTGTTGGTGATGCTGTCATGGAGAACTCTTTCTTACGGCTACTTGGCCATGTCGAATTAGATCTTCCAGAAGCACCTGAGAAAGCAGCACGTCCTCCTGTGCCACCTGTTGATCCATACTCAAGATATGGGCCCAAAGCAGAGATTACCCACTTATTCAGGGCTCCTGAAAAGCGACCTCCCCAACAACTCTCTCTTGCTTTCTTGGGTGTAACCCTTTTGCCATTTATTGGCTTTTTGGTTGGGCTATTACGTTTGGGGGTGAACCTGAAAAATTTCCCTGGTTCAACCGTACCTGCTACATTTGCCATCCTCTTCCATCTTGGTATTGCTGCAGTTCTGTTGCTTTATGTACTTTTCTGGTTGAAGCTGGACCTATTCACTACACTCAAAACATTTGGTCTTTTGGGAGCTTTCTTGATGTTTGTCGGACACAGAATTCTTTCCCATCTTGCTTTGACATCAGCCAAGGTGAAATCTGCATGA 1419 0.4158 MYCNFSDDGTFYFDEKFVGGPEHLGSLSTTASVVRGVTAFAAVTSGKINLPGDKILGLAKFFLGIGIPGDAKDFYNQVESLSFLESNRISIPLILSLPETVYSLTKKGQLKVRVNTVLGSAAPPLTVKLVQAFSTGAKDSAVIDSKELQYNEKSGFHFLDSIPKNVDVGTYVFVFEILLHESDSEKVYATGGQIHVPIYVTGIIKVGNAEIAVLDSDLGSIETQKALDLAGNDAVSLSANHLQKLRLSFQLESPHGHVFKPHQAFLKLRHETKIEHIFLVGNTGKKFEIILDFLGLVEKLYYLSGRYDIELTVGDAVMENSFLRLLGHVELDLPEAPEKAARPPVPPVDPYSRYGPKAEITHLFRAPEKRPPQQLSLAFLGVTLLPFIGFLVGLLRLGVNLKNFPGSTVPATFAILFHLGIAAVLLLYVLFWLKLDLFTTLKTFGLLGAFLMFVGHRILSHLALTSAKVKSA. 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05615 472 PANTHER RIBOPHORIN II 6 471 IPR008814 GO:0006487|GO:0008250|GO:0016020
Seca8g05615 472 Pfam Oligosaccharyltransferase subunit Ribophorin II 13 463 IPR008814 GO:0006487|GO:0008250|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05615 Seca-Chr8 147677041 147682116 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05615 K12667 - gmx:100814831 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05615 8 147677041 147682116 Seca8g05615 8 147677041 147682116 ECH
Seca8g05614 8 147674391 147675209 Seca8g05615 8 147677041 147682116 PCT