Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05614 ATGGCCACAAACGCAGTAGGAGCAGCATTTGCATTTCTGCTGCTTCTTCTTCTCCCCTTCTCGATCTGCCGAACCGTCCACCCGATCTCTGATTCTCACAGATCCGCTGCCTCCGATCTCTTCGCCCCCACCGATGGATCCTTAGAAGATGCGTACGAGGCCCTGAGAGTTTTTGAGATTCTCGCAATCGAGAAGAAGCCTCCTGTGAGCACGGCCACTTGTCCCAAAGTGTTGCAAAATCTAGGGTCATATTCCCCTCTTAAGGATTTGTTCTATGCCTTGAAAGTTAATGCCATATTAAAATGCAACGTTGGTGGGGAGGTTTTCAAGGATATTGCTTCAAGACTTAAAGCCACCGTCTCTGATGCAAGTACTTTGCTTGACATATACTACTCAATAGGAAGTTTGGTTCTGATAAAGGTAATTATCTGGTCTCTACTTTAA 444 0.4595 MATNAVGAAFAFLLLLLLPFSICRTVHPISDSHRSAASDLFAPTDGSLEDAYEALRVFEILAIEKKPPVSTATCPKVLQNLGSYSPLKDLFYALKVNAILKCNVGGEVFKDIASRLKATVSDASTLLDIYYSIGSLVLIKVIIWSLL. 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05614 147 Pfam Oligosaccharyltransferase subunit Ribophorin II 12 141 IPR008814 GO:0006487|GO:0008250|GO:0016020
Seca8g05614 147 PANTHER RIBOPHORIN II 14 140 IPR008814 GO:0006487|GO:0008250|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05614 Seca-Chr8 147674391 147675209 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05614 K12667 - gmx:100780415 171.014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05614 8 147674391 147675209 Seca8g05614 8 147674391 147675209 ECH
Seca8g05614 8 147674391 147675209 Seca8g05615 8 147677041 147682116 PCT