Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05575 ATGGGTATGATCAGAAAACGTTTCTCTCTTCCCTCTCTCTTTCTCTTCACTGTTACCGGTCTCCTTCTTCATCCTCTGTCAGATGCAGATTACACAGACTTGGTTTACAAGGGCTGTGCAGAACAGAAACTGCATGACCCATCTGGGATATACTCACAGAACCTCCAATCGCTCTTGGTTTCTCTGGTGGCACAATCTGAACAAAAGGCCTTCTTCACCACAACCTCTGGTGAAGGCCAGGATGTGATGATGGGTCTGTACCAATGCAGAGGAGACCTCTCAGTCTCTTCTTGCTACAACTGTGTGAGCAAGATTCCTGATATGCTGGACAAGCTCTGTGGCAAGGTGGTGGCTGCAGCGCGTGTCCAGCTCAATGGGTGCTGCCTGAGGTACGAGGTTGTGGGGTTCAAGCAGGTACCTGAGACTCAGATGATTTACAAGGTTTGTGGGTCCAAGCAGGTGAGTGATGACGGGTTTGGGGCGATGAGGGACTCTGCATTTGATATGGTGGAAAATGGAGTGAAAAATGATGGGAAGTTATTTTACATTGGGAGTTATCAATCTCTCTATGTGTTGGGGCAGTGTGAGGGTGATTTGGCCAATGATGATTGTGGAGATTGTGTGAAGAGTGCTGAAGACCAGGCCAAAGCTGGATGTGGTGATTCAATTTCAGCACAAATTTATCTGCACAAGTGTTTTATCAGCTACAGCTTTTACCCCAAGGGAATGTCCAGCAAGTCATCTTCTCCAGGTGTTCAATAG 762 0.4738 MGMIRKRFSLPSLFLFTVTGLLLHPLSDADYTDLVYKGCAEQKLHDPSGIYSQNLQSLLVSLVAQSEQKAFFTTTSGEGQDVMMGLYQCRGDLSVSSCYNCVSKIPDMLDKLCGKVVAAARVQLNGCCLRYEVVGFKQVPETQMIYKVCGSKQVSDDGFGAMRDSAFDMVENGVKNDGKLFYIGSYQSLYVLGQCEGDLANDDCGDCVKSAEDQAKAGCGDSISAQIYLHKCFISYSFYPKGMSSKSSSPGVQ. 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05575 253 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 8 245 - -
Seca8g05575 253 Pfam Salt stress response/antifungal 46 132 IPR002902 -
Seca8g05575 253 Pfam Salt stress response/antifungal 185 238 IPR002902 -
Seca8g05575 253 Gene3D - 141 240 IPR038408 -
Seca8g05575 253 Gene3D - 31 136 IPR038408 -
Seca8g05575 253 ProSiteProfiles Gnk2-homologous domain profile. 141 241 IPR002902 -
Seca8g05575 253 ProSiteProfiles Gnk2-homologous domain profile. 32 136 IPR002902 -
Seca8g05575 253 FunFam cysteine-rich repeat secretory protein 3 142 240 - -
Seca8g05575 253 FunFam cysteine-rich repeat secretory protein 3 31 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05575 Seca-Chr8 147233007 147234479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05575 71 240 Receptor kinase-like Gene Family AT4G23140 29.282 2.74e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05575 - - gmx:100795002 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05575 8 147233007 147234479 Seca8g05575 8 147233007 147234479 ECH
Seca8g05575 8 147233007 147234479 Seca2g04433 2 129719691 129720990 PCT