Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04433 ATGGGTATGCTCCTGTTTCTTCTTCTGTTATTTTTTGTGCTGGTTTTTGGTCCCATTTCTTCTTCAGCTGCAGATAACACAAACTTGGTGTACAAGGGTTGTGCTGAGCAGAAACTACAAGACTCAGAGAATCTGAAATCACTGTTGTCTTCTCTTGTGTCGGCTTCAGGGCAGAAGGGTTTCGCCGCCACAACCGCCGGCGACGGTCAGAACGCGATCACCGGCGCGTACCAATGCAGAGGGGACCTAACGAACTCCGATTGCTACACCTGCGTCAGCAAGATTCCCGGCATGCTGGGTAAGCTCTGCGGCGGTGACGTGGCGGCGGCGAGGGTCCAGCTCAGCGGTTGTTACCTGAGGTACGAGGTTGTCGGTTTCAAGCAGGTGCCTCAGACTCAGCTGCTCTACAAGGTTTGTGGCTCAAGGAAGGTTGTTGATGGTGGTGGATTTGAGGTTAGGAGGGACTCAGCTTTTGGAATGGTGGAGAATGGTGTGAAGAGTAGTGGGAGCTTGTTTTACACTGGGAGCTATCAATCTCTCTATGTGTTGGGACAGTGTGAGGGTGATTTGGGAAGTGATGATTGTGTTGCTTGTATCAAGAGTGCTGAGGAACAGGCTAAACTTGAGTGTGGTGACTCAATTTCTTCACAGATTTATCTCTATAATTGCTATCTCAGTTATAGCTTTTACCCCAATGGAGTTCCCACTATGTCATCTTCTCAAGGGATATCAGGGTCAGGGGGTCATCCACACACGCAGAGGACAGTGGCTCTTGCAGTAGGAGGGGTTGCAGCACTTGGATTCTTGATTGTTTGTTTGCTATTTCTCAAGTCAGTGTTGAAGAAAAAAGGTGGAAAGCGTTGA 864 0.4907 MGMLLFLLLLFFVLVFGPISSSAADNTNLVYKGCAEQKLQDSENLKSLLSSLVSASGQKGFAATTAGDGQNAITGAYQCRGDLTNSDCYTCVSKIPGMLGKLCGGDVAAARVQLSGCYLRYEVVGFKQVPQTQLLYKVCGSRKVVDGGGFEVRRDSAFGMVENGVKSSGSLFYTGSYQSLYVLGQCEGDLGSDDCVACIKSAEEQAKLECGDSISSQIYLYNCYLSYSFYPNGVPTMSSSQGISGSGGHPHTQRTVALAVGGVAALGFLIVCLLFLKSVLKKKGGKR. 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04433 287 Pfam Salt stress response/antifungal 42 122 IPR002902 -
Seca2g04433 287 Pfam Salt stress response/antifungal 172 229 IPR002902 -
Seca2g04433 287 Gene3D - 131 231 IPR038408 -
Seca2g04433 287 Gene3D - 25 126 IPR038408 -
Seca2g04433 287 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 4 279 - -
Seca2g04433 287 ProSiteProfiles Gnk2-homologous domain profile. 23 126 IPR002902 -
Seca2g04433 287 FunFam cysteine-rich repeat secretory protein 3 26 126 - -
Seca2g04433 287 FunFam cysteine-rich repeat secretory protein 3 132 231 - -
Seca2g04433 287 ProSiteProfiles Gnk2-homologous domain profile. 132 232 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04433 Seca-Chr2 129719691 129720990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04433 8 228 Receptor kinase-like Gene Family AT5G40380 26.383 4.71e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04433 - - gmx:100786830 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04433 2 129719691 129720990 Seca2g04433 2 129719691 129720990 ECH
Seca8g05575 8 147233007 147234479 Seca2g04433 2 129719691 129720990 PCT