Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05475 ATGAAACGCATAGATATCTTCTGTGCTTCTCAAGCCTCAACAGCCATATGTCATAGCATGGATCAAGCCTCCTGCTCCTCTTCCAATGCCATTCAACTAGGAGGCCGAACCATTGATCGCCACAACCCCATTATCAATGATTCAAGAAGAAGCACCTCAAGAGCCCCATGTTCTTCTTCTCAGCCACCCATTGACCCCAAGCCTTACCAAAAGACCAAGATAAAAAACTCTTCTTCAAAGCCAAATGGCCAGAACAAGATAAATGCAACCAAAGTTCATGAACAGAAGAACAAAAGTACAGCAGAAAAGCTCACTGAACATGTCGCCAACAGTTACTCTTCTAAGCCAATTGATAGTAATCTGCGAAGGAGTTGGCATAAGCCACCTGTTGATTCAATCACTCCTCCTGGTTCAACTAGATCATTGCTCAGTGACACAGCCTTTTTAGATGGTTCATCAGATAATGGTCCAGTTTTAGCATTAACTACTGTTGATAATAAAAGGTCTCAAGTTGTTCTTCAAGATGAAACAAACCCTGCATTTAAACCCTCTAGTTCTTCTTGTCCAAAATCTGGTTCCTCAGACCAGGTTGTAGTACTGAAGGTTTCTTTGCATTGCAAAGGTTGTGAAGGGAAGGTGAGAAAACACCTCTCCAGAATGCAAGGAGTTACTTCCTTCAACATAGATTTTGCAGCAAAGAAGGTGACAGTGGTTGGAGATGTGACTCCATTGAGTGTCTTGGCAAGCATATCAAAGGTTAAGAATGCACAATTATGGCCAGCATCTGCCTCAGCAGTTGGATCTGGTACCATAGAAACAAAGAAACAAAATTCATGTAATTGA 843 0.4187 MKRIDIFCASQASTAICHSMDQASCSSSNAIQLGGRTIDRHNPIINDSRRSTSRAPCSSSQPPIDPKPYQKTKIKNSSSKPNGQNKINATKVHEQKNKSTAEKLTEHVANSYSSKPIDSNLRRSWHKPPVDSITPPGSTRSLLSDTAFLDGSSDNGPVLALTTVDNKRSQVVLQDETNPAFKPSSSSCPKSGSSDQVVVLKVSLHCKGCEGKVRKHLSRMQGVTSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQLWPASASAVGSGTIETKKQNSCN. 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05475 280 CDD HMA 199 252 IPR006121 GO:0046872
Seca8g05475 280 MobiDBLite consensus disorder prediction 36 139 - -
Seca8g05475 280 SUPERFAMILY HMA, heavy metal-associated domain 196 253 IPR036163 GO:0046872
Seca8g05475 280 PANTHER OS08G0405700 PROTEIN 4 265 IPR044526 -
Seca8g05475 280 Pfam Heavy-metal-associated domain 200 252 IPR006121 GO:0046872
Seca8g05475 280 MobiDBLite consensus disorder prediction 48 90 - -
Seca8g05475 280 MobiDBLite consensus disorder prediction 104 119 - -
Seca8g05475 280 Gene3D - 193 257 - -
Seca8g05475 280 ProSiteProfiles Heavy-metal-associated domain profile. 195 261 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05475 Seca-Chr8 145974733 145976060 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05475 - - gmx:100813295 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05475 8 145974733 145976060 Seca2g04537 2 131183286 131185478 PCT