Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04537 ATGAAAGGCATAGATATCTTTTGTGCATCACAGGCCTCAACAGCCATATGTTTTAGCATGGATCAAGCCTCTTCCTCTTCCTCCTCCTCTTCCATTACCACTCAATTAGGTGGCAGAGCCATTGACCGCCACAACCCCATCATCACAGATCCAAGAAGAACCCCCTCCAGAGACCTCACTGCCCCAAGTTGTTCTTCTTCTCAGCTACCCACTGACCCCAAACCTTTCCATGATCTCCAAAAGGCCAAGAAAAACACAACTTCAAAGCCAAGTGAAAAGAAAAAGAAAATTGCAACAAAGGGTCATGATCAGAAGAAGAAAAGTATAGCAGAAAAGCAGACTGAACATATTACCAACAATTACTCTTCTAAACCAATTGATAGTATTCTGAAGAGGAGTTGGGTTAGACCACCTTCTGGTTTAATCACTCCTCCTGGTTCATCAAGATATTTGCTTAGTGACACCACTTCCTTGGATGGTGTATCAGATTATGACCCTGTTTTAGCTTTAACCAAGGTTGATAACAAAAAAGGTCAAGTCATTCATGAAGATGAAACCAACCATTCATCTAAACCCTCTAGCTCCTCTCTTCCAAAGTCTGGTTCTTCAGACCAGGTTGTGGTATTGAGGGTTTCTCTGCACTGCAAAGGTTGTGAAGGGAAAGTGAGGAAACATCTCTCTAGAATGCAAGGTATGCAAGTCACCTCATCTCATGTAAATAATAAATTCTTCTACTTAATATTTAGCATAAAAGGACTTGATTTGTAG 768 0.4115 MKGIDIFCASQASTAICFSMDQASSSSSSSSITTQLGGRAIDRHNPIITDPRRTPSRDLTAPSCSSSQLPTDPKPFHDLQKAKKNTTSKPSEKKKKIATKGHDQKKKSIAEKQTEHITNNYSSKPIDSILKRSWVRPPSGLITPPGSSRYLLSDTTSLDGVSDYDPVLALTKVDNKKGQVIHEDETNHSSKPSSSSLPKSGSSDQVVVLRVSLHCKGCEGKVRKHLSRMQGMQVTSSHVNNKFFYLIFSIKGLDL. 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04537 255 PANTHER OS08G0405700 PROTEIN 6 239 IPR044526 -
Seca2g04537 255 MobiDBLite consensus disorder prediction 23 38 - -
Seca2g04537 255 SUPERFAMILY HMA, heavy metal-associated domain 206 242 IPR036163 GO:0046872
Seca2g04537 255 MobiDBLite consensus disorder prediction 56 73 - -
Seca2g04537 255 CDD HMA 208 240 IPR006121 GO:0046872
Seca2g04537 255 MobiDBLite consensus disorder prediction 76 113 - -
Seca2g04537 255 MobiDBLite consensus disorder prediction 176 203 - -
Seca2g04537 255 Gene3D - 203 243 - -
Seca2g04537 255 MobiDBLite consensus disorder prediction 23 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04537 Seca-Chr2 131183286 131185478 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04537 - - gmx:100810015 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04537 2 131183286 131185478 Seca2g04537 2 131183286 131185478 ECH
Seca8g05475 8 145974733 145976060 Seca2g04537 2 131183286 131185478 PCT