Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05433 ATGGCGGCCGTTACCCGCCTTGCAAAGCGCGCGTCCCCCTTCTCTTCCATCGCGAGGAGATGCTTCTCCTCCAAAGTCAACTCTCACGCGCCGCCGCGCGAAGATCCGAAGAACAGCCATGTCCGGTGGGTCTTCCTCGGCTGCCCAGGCGTCGGCAAAGGCACCTACGCTAGCCGTCTCTCTAATCTCCTCGGTGTCCCTCACATCGCCACCGGCGATCTCGTTCGCGAAGAACTCACCTCCTCTGGCCCCCTTTCTTCCCAGTTGTCAGAAATTGTAAAACAAGGTCAATTGGTGTCAGATGAAATTATTATAAGTTTATTGTCAAAGAAACTTGTTTCTGGGGATGCTAAAGGCGAACAAGGATTTATTCTTGATGGTTTTCCTCGAACAATAAAGCAAGCAGTGAGTATCTTCACTTTGGAAATATTGGAAGGGGTAACTGACATTGATTTGGTTATCAATCTGAGGCTTCGAGAAGATGTACTGCTTGAGAAATGCCTTGGTAGGAGAATTTGCAATCAGTGTGGGGGAAATTTTAATGTTGCTTCCATTAACATCAAGGCTGAGAACGGGAACCCTGGAATTATCATGGCTCCACTTCTTCCTCCTAGGGATTGTATGTCAAAGCTCATTACTCGATCAGATGATACTGAAGCAGTAGTCAAAGAAAGGCTTCGAATATACAATGAAATGACTCAGCCTGTGGAGGAGTTTTACCGCAGTAGAGGAAAATTGTTGGAATTTAACCTGCCTGGGGGAATCCCAGAATCTTGGCCAAAGTTGCTACAAGCTCTTAATCTTGATGATTATGAGGACAAGCGCTCTGCTGCAGCATAA 840 0.4714 MAAVTRLAKRASPFSSIARRCFSSKVNSHAPPREDPKNSHVRWVFLGCPGVGKGTYASRLSNLLGVPHIATGDLVREELTSSGPLSSQLSEIVKQGQLVSDEIIISLLSKKLVSGDAKGEQGFILDGFPRTIKQAVSIFTLEILEGVTDIDLVINLRLREDVLLEKCLGRRICNQCGGNFNVASINIKAENGNPGIIMAPLLPPRDCMSKLITRSDDTEAVVKERLRIYNEMTQPVEEFYRSRGKLLEFNLPGGIPESWPKLLQALNLDDYEDKRSAAA. 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05433 279 ProSitePatterns Adenylate kinase signature. 123 134 IPR033690 -
Seca8g05433 279 Pfam Adenylate kinase 46 244 - -
Seca8g05433 279 CDD ADK 42 250 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca8g05433 279 Gene3D - 27 270 IPR027417 -
Seca8g05433 279 PANTHER NUCLEOTIDE KINASE 15 264 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca8g05433 279 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 267 IPR027417 -
Seca8g05433 279 NCBIfam adenylate kinase 42 267 IPR006259 GO:0004017|GO:0005524|GO:0016776
Seca8g05433 279 PRINTS Adenylate kinase signature 44 57 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca8g05433 279 PRINTS Adenylate kinase signature 123 139 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca8g05433 279 PRINTS Adenylate kinase signature 231 245 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca8g05433 279 PRINTS Adenylate kinase signature 72 86 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca8g05433 279 Hamap Adenylate kinase [adk]. 41 267 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05433 Seca-Chr8 145331644 145335299 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05433 K00939 - gmx:100777619 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05433 8 145331644 145335299 Seca8g05433 8 145331644 145335299 ECH
Seca8g05433 8 145331644 145335299 Seca2g04572 2 131838458 131843651 PCT