Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04572 ATGGCGGCCATAACCCGCCTCGTAAAGCGCACCCCTTCCCTCTCTTCCTTGGCGCGTGGATTCATGTCCCCCTCCTCGCCGCGTGACAACCGGAATGTCCAGTGGGTCTTCTTGGGTTGCCCCGGCGTCGGCAAAGGCACCTACGCCAGCCGTCTCTGCAACCTCCTCGGCGTTCCTCACATCGCCACCGGTGACCTTGTTCGCAATGAGCTCGCTTCCAATGGCCCCCTTTCTTCCCAGCTATCAGAAATTGTAAATCAAGGTCAATTGGTTTCAGATGAAATTATCATAAGTTTATTGTCAAAGAGGCTGGCTGATAGGGAAGCTAAAGGTGAATCAGGATTTATTCTTGATGGTTTTCCTCGAACAATAAAGCAAGCAGTGAGTATTTTTATATTTGAAATATTGGAAGGGGTAACTGATATTGACTTGGTGGTCAATCTGAAACTCCATGAACAAGTACTGATTGCAAAATGCCTTGGTAGGAGAATTTGCAATCAGTGTGGAGGAAATTTTAATGTAGCCAACATTAACATCAGGGGTGAGGATGGGCGCCCTGGAATGACCATGGCTCCACTTCTTCCTCCTGGCCATTGTCTGTCAAAGCTCATTACTCGCCCAGATGACACTGAAGAAGTAGTCAAAGAAAGGCTTCGTATATACAATGAAATGAGTCGGCCTGTGGAGGAATTTTACCGTAGTAGAGGAAAACTGTTGGAGTTTGACCTGCCAGGAGGGATCCCAGAATCTTGGCCAAAGTTGCTGCAAGCTCTTAATCTTGATGATTATGAAGAGAAGCAGTCTGCTGCAGCATAA 816 0.4743 MAAITRLVKRTPSLSSLARGFMSPSSPRDNRNVQWVFLGCPGVGKGTYASRLCNLLGVPHIATGDLVRNELASNGPLSSQLSEIVNQGQLVSDEIIISLLSKRLADREAKGESGFILDGFPRTIKQAVSIFIFEILEGVTDIDLVVNLKLHEQVLIAKCLGRRICNQCGGNFNVANINIRGEDGRPGMTMAPLLPPGHCLSKLITRPDDTEEVVKERLRIYNEMSRPVEEFYRSRGKLLEFDLPGGIPESWPKLLQALNLDDYEEKQSAAA. 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04572 271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 259 IPR027417 -
Seca2g04572 271 Pfam Adenylate kinase 38 236 - -
Seca2g04572 271 ProSitePatterns Adenylate kinase signature. 115 126 IPR033690 -
Seca2g04572 271 Gene3D - 22 262 IPR027417 -
Seca2g04572 271 PRINTS Adenylate kinase signature 64 78 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca2g04572 271 PRINTS Adenylate kinase signature 115 131 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca2g04572 271 PRINTS Adenylate kinase signature 223 237 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca2g04572 271 PRINTS Adenylate kinase signature 36 49 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca2g04572 271 CDD ADK 34 242 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca2g04572 271 NCBIfam adenylate kinase 34 259 IPR006259 GO:0004017|GO:0005524|GO:0016776
Seca2g04572 271 PANTHER NUCLEOTIDE KINASE 23 256 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca2g04572 271 Hamap Adenylate kinase [adk]. 33 259 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04572 Seca-Chr2 131838458 131843651 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04572 K00939 - gmx:102666238 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04572 2 131838458 131843651 Seca2g04572 2 131838458 131843651 ECH
Seca8g05433 8 145331644 145335299 Seca2g04572 2 131838458 131843651 PCT