Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05396 ATGGATTCCAAGTGCTCTAAATTCCACGTTCTTGGCGGTTCCATAGCTAGGCGTGTGTTTTTCCGCGCATTGTTACTTGCCTCTGCTGTTTCCATCGTTTCTCTGCTCCGTTTTCTTACCACCATCGATTTGGGATCCTTGGCTCCCAAGACCTATGTTGACTGCATTGCACATTCACAGCATTCACATTCCAAAGACACCACTTTGACTCCCGGTTCTTACTTGTTTCAGAGTCGGGTCCTAAACACCTTTTGGGGTTCCTTTGAATCCTTGAATTGCATGAAAGACGTCAACTTGACTTCCACTGTTGTCACAGAGCTAATGGGTAAACGACTTTTGGACTGTGGCGCAGAAAGTCTCTGCATTGGAGAAGAATCACACTTAGCTGTCTCCGCAATGCAAAATTTGGGATTCTCCAGTGTCATTGGTGTCCACAAGCACCGTTTTTTCTCCTTAAACCAGAAGAAAATGGTGTACCAGCTTGAGTACCATGACTGTTCATTTGATTTCGTGTTCTCCAAGGATCTAGACAAGGTTTCAGTCCCTGCATTGCTCGTGCTTGAGGTTGAGCGTATTCTTAAGCCTGGTGGAATCGGTGCCTTGCTTGTGGCTGTGGATGCTAGTGGTGTTGGTCCTGGTTCATCAACCACCTCCAATGACTTGATAAGATCTGCTACCCCAGTTTCATCATTGCTGAGATCTTCCAGCGTGGTGCATGTTAGTTATGTGAATGAGCATAGCCTTGTGGTTTTCAAGAAAAGATCTGAAAACACAAGCTCCTCTTTCTTTCATTATGGCCTTCCAAAAACAGACTGTGCAAGATTTACCTTCACCAAGCCTCTCATGGAGCAGATGGAGCCTCTTGTGGAGGAAAAACCACCTCCTAAGTATGAGAAAAGCATCTCCTATTTGCCTAAGCTTGTGGACATTTCTAATAAGAAGCGTTTGGTGTATGTTAATATTGGGGTAGGGGAGCCAATTATGAATGCAGATGTCAATGATTGGTTCCCACCATCTTATCCCATTGATCAGAAGACTTTCAGTGTGTATTTTGTTCATTACAACACTTCAGTTCTGTTGTCTTATGTGAAAAGACCTCGTGTCACCTTTGTTTATCATCCAGGATTAGCTGGAAAGGCTGGTGCAGCCAAGCCTGGTGTTGATGGAGATCTTGATCCTTTGCTGGGAGAGGAAGAGTTTGATTTCCTTGCCTGGTTTAAAGAAACTGTGCAGAATGCAGATTTTGTTGTCCTGAAGATGAATGCAGGGGAAGTTGAAATGAAGTTTTTGATGGATATATTTGAAAATGGAGCTATATGCTTCGTTGATGAGCTATTTCTTAGCTGCTCAGAGAATGGAGATGGTGAAAGAGGAACTATGAGCAGCAGGGAACGGTGCATGGATATTTACAAGGGTCTCAGAAGCAATGGCGTTTATGTTCATCAATGGTGGGAAGCTAAATTGCATCAAGGGCCTCAAGTGTCATATGTAAGCGCTGGAGGTGGGGTAGTACACTTTAGGGTGATTTTAATTTGCAAACCGTGGTCCTCTGCATGCTTTAAAGACCAATTATTCGAGTTCAGGAGAGAGCAAGCATGGGAAGTAACTAGTTTAAGGTCTGCTTTACCAATTGAATAA 1638 0.4371 MDSKCSKFHVLGGSIARRVFFRALLLASAVSIVSLLRFLTTIDLGSLAPKTYVDCIAHSQHSHSKDTTLTPGSYLFQSRVLNTFWGSFESLNCMKDVNLTSTVVTELMGKRLLDCGAESLCIGEESHLAVSAMQNLGFSSVIGVHKHRFFSLNQKKMVYQLEYHDCSFDFVFSKDLDKVSVPALLVLEVERILKPGGIGALLVAVDASGVGPGSSTTSNDLIRSATPVSSLLRSSSVVHVSYVNEHSLVVFKKRSENTSSSFFHYGLPKTDCARFTFTKPLMEQMEPLVEEKPPPKYEKSISYLPKLVDISNKKRLVYVNIGVGEPIMNADVNDWFPPSYPIDQKTFSVYFVHYNTSVLLSYVKRPRVTFVYHPGLAGKAGAAKPGVDGDLDPLLGEEEFDFLAWFKETVQNADFVVLKMNAGEVEMKFLMDIFENGAICFVDELFLSCSENGDGERGTMSSRERCMDIYKGLRSNGVYVHQWWEAKLHQGPQVSYVSAGGGVVHFRVILICKPWSSACFKDQLFEFRREQAWEVTSLRSALPIE. 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05396 545 PANTHER PEPTIDE UPSTREAM PROTEIN 1 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05396 Seca-Chr8 144955065 144957361 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05396 - - lja:Lj5g3v0626880.1 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05396 8 144955065 144957361 Seca2g04622 2 132232294 132233960 PCT