Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04622 ATGGGTGGGGGCTGGTACGAACCGACACCGAAGAAGAGGATTCCAAGGAGGGTCTGGTTAATTTTCCAAAAATCAATGGGTCTCCTCGTGGGTGGAAATCATACTTCTTCCAGGCGCGTGTTCCTTCGCTCAATCCTACTTGCCTCTGCCATTTCCATGGTTTCTCTGCTCCGCACTCTGTCGGTCATTGATTTGGGAACCCTAGCTCCGGTGACCACATATATTAACTGCGTTGCGGATTTAGATTCGCGTTTCGAAAACGTCACCTCGAGTCCCGGTTACTTCTTGTTTCAGACCCACTTCTGGGGTGCCATGAATTGCGAGAAAGACGTTAACTTGACCCTGAATGTGGTCAATGAGCTAATGGGTAAACAGCTTTTGGACTGCGGAGCCAAGAGCCTTTGCATTGGAGAAGGGTCCTCAATGGCCGTCATGGCAATGAAACAGTTGGGATTCTCCAGTGTCAGTGGTGTCCACACACACCGCTTTTTCTCCCTCAAGCTAGATCACAAGGACTCTTCATTCGATTTCGTGTTGTCTAGGGACTTGGACAAGGTTTCAGTCCCTGCTTTGCTTGTGCTTGAGGTTGAGCGTGTCCTTAAGCCAGGTGGAATTGGTGCCCTGCTTGTGAGTGCCTCTGGTTCCCACCCAAATGAGTTGATAAGGGCAGCTACCCCAGTGTCCTCATTGTTGAGATCTTCCAGTGTTGTGCATGTGGGTGCTATCAATGAACTTAACCTTGTGGTTTTCAAGAAAAGATCTGAAAATGCCACTTCCTTTTATCAGTATCCTTTCCCAGCGGATTGTCCAAGTCTGGCCTTTACCAAACCTCTCATTGAGCTGATGGAACCTCTTGTGAGTGAAAAACCACCTCCTGAGTTAGAGAGAAAGATCACCTATTTGCCTAAGTTTGTGGATGTTTCAGCTAGGAAGAGGATGGTGTATATTGATGTTGGGGTAGGGGAGCTCCTGAATGCAAATGCCAGTGATTGGTTCCTGCCATCATACCCCATTGATCAGAAAGATTTCAGTGTCTATTTTGTTCATTACAACACCTCAATCTTGTTGTCCTATGTGAAGCGACCTGGTATCACCTTTGTTTATCACCCTGGATTGGCTGGTAAGGTCACTGCTGAGGTTGGTACAGATGGAGACCTGGACCCTTTCCTTGCGGAGGAAGAGTTTGATTTCCTTGCCTGGTTCAAAGAAACTGTGCAATATGCAGATTATGTTGTCCTGAAGATGAATGCAGGAAAGGTTGAACTCAAGTTCCTCTCGGAAATATTTGACAGTGGAGCTATATGCTTTGTTGATGAGTTATTTCTCAGATGTCCTGAGAGGGGATATGATGATAAAACTGTGACCAGCAAGGAAAGCTGCATGGATATATACAAGGGTCTTAGAAGCAATGGAGTCTATGTCCATCAATGGTGGGGAGACTAA 1443 0.4657 MGGGWYEPTPKKRIPRRVWLIFQKSMGLLVGGNHTSSRRVFLRSILLASAISMVSLLRTLSVIDLGTLAPVTTYINCVADLDSRFENVTSSPGYFLFQTHFWGAMNCEKDVNLTLNVVNELMGKQLLDCGAKSLCIGEGSSMAVMAMKQLGFSSVSGVHTHRFFSLKLDHKDSSFDFVLSRDLDKVSVPALLVLEVERVLKPGGIGALLVSASGSHPNELIRAATPVSSLLRSSSVVHVGAINELNLVVFKKRSENATSFYQYPFPADCPSLAFTKPLIELMEPLVSEKPPPELERKITYLPKFVDVSARKRMVYIDVGVGELLNANASDWFLPSYPIDQKDFSVYFVHYNTSILLSYVKRPGITFVYHPGLAGKVTAEVGTDGDLDPFLAEEEFDFLAWFKETVQYADYVVLKMNAGKVELKFLSEIFDSGAICFVDELFLRCPERGYDDKTVTSKESCMDIYKGLRSNGVYVHQWWGD. 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04622 480 Pfam Methyltransferase domain 167 205 IPR013216 GO:0008168
Seca2g04622 480 PANTHER PEPTIDE UPSTREAM PROTEIN 34 480 - -
Seca2g04622 480 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 156 216 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04622 Seca-Chr2 132232294 132233960 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04622 - - gmx:100806816 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05396 8 144955065 144957361 Seca2g04622 2 132232294 132233960 PCT