Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05329 ATGGGAGAGCAAAAGGAGCAGCCAAAGAATGAAACCGAGAAGAAGCCCGACGAGGGACCCGTTCCTGTCGTTTACAAGCTTGACTTGCATTGTGAGGGATGCGTCAAGAAGATAAAACGAACCGTTCGCCATTTCGAGGGTGTGGAAACCGTTAAGGCAGATCTGTCGGCTAACAAAGTGACAGTTACCGGTAAAATGGACGCCGGCAAACTGCGTGATAAGCTGGCCGAGAAAACCAAGAAGAAGGTTGATATTATCTCCCCTCAGCCCAAAAAGGAAGAAGCCGCCGCCGCTGAGAAACCGCCGGAGAAGAAACCCGAAGAGAAGAAGCCAGAAGAAAAGAAACCAGAAGAAAATAAGCCTAAAGAGAGCTTAATTTCACTAACTGACTTTTCTATTAATTTATTTCAGAGCACGGTGGTTTTGAAGATCAGATTGCACTGTGACGGTTGCATTACGAAAATTCGAAGAATCATTCTCAAATTCAAAGGTGTGGAATCGGTGAGCCTTGACGGAGACAAGGACTTGGTGACGGTGAAGGGAATTATGGACGTAAAGGAGCTGGTAGCGTACCTGAAGGAGAAGCTTAAGCGGAACGTGGATGTGGTCCCACCTAAGAAAGAGAAAGATGGCGGGGGAGAGAAGAAAGAGAACAAGGAAGGCGGTGGTGAGAAGAAAGAGGAAGGTGCGGCGGCGAAGGTGGAGGTTAACAAAATGGAGTTTCAATACCCACCACCACCTCCCATGTATTGGTTCGATGGAAACTTTCCCGGTCAAACCAGTCACGCTTTGGAGGTTCACCCTGGGTTCGCTAATCATTACGTGGAGCCAGGGTATGGGTATAACATGAACCATGGTTATCCTGTGCAGCCGCCTGTACCGTTTTATATGCACCATAACGCTCCTCCTCCGCAGATGTTTAGTGATGAGAACCCCAATGCTTGTTCCATCATGTGA 957 0.4807 MGEQKEQPKNETEKKPDEGPVPVVYKLDLHCEGCVKKIKRTVRHFEGVETVKADLSANKVTVTGKMDAGKLRDKLAEKTKKKVDIISPQPKKEEAAAAEKPPEKKPEEKKPEEKKPEENKPKESLISLTDFSINLFQSTVVLKIRLHCDGCITKIRRIILKFKGVESVSLDGDKDLVTVKGIMDVKELVAYLKEKLKRNVDVVPPKKEKDGGGEKKENKEGGGEKKEEGAAAKVEVNKMEFQYPPPPPMYWFDGNFPGQTSHALEVHPGFANHYVEPGYGYNMNHGYPVQPPVPFYMHHNAPPPQMFSDENPNACSIM. 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05329 318 SUPERFAMILY HMA, heavy metal-associated domain 137 194 IPR036163 GO:0046872
Seca8g05329 318 CDD HMA 146 181 IPR006121 GO:0046872
Seca8g05329 318 MobiDBLite consensus disorder prediction 1 22 - -
Seca8g05329 318 Pfam Heavy-metal-associated domain 143 196 IPR006121 GO:0046872
Seca8g05329 318 Pfam Heavy-metal-associated domain 28 81 IPR006121 GO:0046872
Seca8g05329 318 SUPERFAMILY HMA, heavy metal-associated domain 24 77 IPR036163 GO:0046872
Seca8g05329 318 MobiDBLite consensus disorder prediction 79 123 - -
Seca8g05329 318 MobiDBLite consensus disorder prediction 1 21 - -
Seca8g05329 318 Gene3D - 21 94 - -
Seca8g05329 318 Gene3D - 135 209 - -
Seca8g05329 318 ProSiteProfiles Heavy-metal-associated domain profile. 20 83 IPR006121 GO:0046872
Seca8g05329 318 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 5 318 IPR044594 GO:0046872
Seca8g05329 318 CDD HMA 29 83 IPR006121 GO:0046872
Seca8g05329 318 MobiDBLite consensus disorder prediction 203 229 - -
Seca8g05329 318 ProSiteProfiles Heavy-metal-associated domain profile. 137 200 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05329 Seca-Chr8 144128358 144130671 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05329 - - gmx:100779502 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05329 8 144128358 144130671 Seca8g05329 8 144128358 144130671 ECH
Seca8g05329 8 144128358 144130671 Seca2g04667 2 132799669 132801102 PCT