Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04667 ATGCATTGCGAGGGATGCGTCAAGAAGATCAAACGAGCCGTTCGACATTTCGATGGTGTGGAGGACGTTAAGGCCGATATTTCCAGTAACAAGTTAACGGTTATTGGAAAAGTGGACCCCGCCAAGGTGCGAGATAAACTGATAGAGAAAATTAAGAAGAATGTTGAGCTTGTTTCTCCTCTGCCTAAGAAAGATTCAGTTGCCGATAAACCGCCGGAGAAGAAGCCCGAAGAGAAGAAGCCTGAAGAGAAGAAACCTGAAGAACAAAAGCCTCAAGAAAAAACCTCGAAACAGGTATGCCTTATGCGAATTTCTTCTTACCTTGTTCAATACGGCACGGTGATAGCGTTGAAAATCAGATTGCACTGTGACGGTTGCATTCAAAAAATTCGGAAGATTATCCTCAAGATCAAAGGAGTTGAATCGGTGGACATTGAAGGAGGGAAAGATTTGGTGACTGTGAAGGGAATGATGGAGGTGAAGGAAATAGTGCCTTATTTGAAGGAGAAGCTGAAGCGGAACGTGGAGGTGGTCCCACCCAAGAAAGATGAAGAAAATAAGAGTAAAGAGAAAGTTGAAAATAATGAAAAAAAGGAGAAGGAGAACAAGGAAGGTGGTGGTGGTGATAATAAGAAAGAGGGTGAGAAAAAAGAGGAAGTTGCAACCAAGGTGGAGATTAACAAAATGGAACACTACGGGTATGGATACCCACAATCTCCCATGTACTGGTACGACCCAGGCCAAAGTAGTAGCAGCAGCAACTATGCAGTGGAGGTTCAACATGGGTATGTGAATGATCAAGGCCAAGGGTACATGGTAGAACCACCCCCATACTACTTGCATCCGCATGATCCAGCTCCACAAATGTTCAGTGATGAGAATCCCAATGCTTGTTCCGTGATGTGA 906 0.4415 MHCEGCVKKIKRAVRHFDGVEDVKADISSNKLTVIGKVDPAKVRDKLIEKIKKNVELVSPLPKKDSVADKPPEKKPEEKKPEEKKPEEQKPQEKTSKQVCLMRISSYLVQYGTVIALKIRLHCDGCIQKIRKIILKIKGVESVDIEGGKDLVTVKGMMEVKEIVPYLKEKLKRNVEVVPPKKDEENKSKEKVENNEKKEKENKEGGGGDNKKEGEKKEEVATKVEINKMEHYGYGYPQSPMYWYDPGQSSSSSNYAVEVQHGYVNDQGQGYMVEPPPYYLHPHDPAPQMFSDENPNACSVM. 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04667 301 MobiDBLite consensus disorder prediction 62 96 - -
Seca2g04667 301 ProSiteProfiles Heavy-metal-associated domain profile. 112 175 IPR006121 GO:0046872
Seca2g04667 301 CDD HMA 1 53 IPR006121 GO:0046872
Seca2g04667 301 Gene3D - 1 56 - -
Seca2g04667 301 Pfam Heavy-metal-associated domain 119 176 IPR006121 GO:0046872
Seca2g04667 301 Pfam Heavy-metal-associated domain 1 53 IPR006121 GO:0046872
Seca2g04667 301 Coils Coil 181 202 - -
Seca2g04667 301 ProSiteProfiles Heavy-metal-associated domain profile. 1 59 IPR006121 GO:0046872
Seca2g04667 301 SUPERFAMILY HMA, heavy metal-associated domain 114 169 IPR036163 GO:0046872
Seca2g04667 301 SUPERFAMILY HMA, heavy metal-associated domain 1 58 IPR036163 GO:0046872
Seca2g04667 301 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 1 301 IPR044594 GO:0046872
Seca2g04667 301 MobiDBLite consensus disorder prediction 66 94 - -
Seca2g04667 301 Gene3D - 112 184 - -
Seca2g04667 301 MobiDBLite consensus disorder prediction 178 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04667 Seca-Chr2 132799669 132801102 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04667 - - gmx:100795652 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04667 2 132799669 132801102 Seca2g04667 2 132799669 132801102 ECH
Seca8g05329 8 144128358 144130671 Seca2g04667 2 132799669 132801102 PCT