Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05308 ATGGGCATACTGTACGACGACGTAGTGATTATCAGGGAACCTGAGAAAGAAGGTGACCCAACTGTGATTACAGTGAATTGCCCTGACAAAACTGGTTTGGGTTGTGATTTGTGTCGTATCATACTCTTCTTTGGTCTGAGCATTGTTAGAGGAGACGTATCAACCGATGGAAAGTGGTGCTACATAGTTTTCTGGGTGGTAGGGAAACAGAAAACGAGGTGGAGTTTGTTGAAGAAGAGGCTGGTTGGGGCATGCCCTTCTTGTTCCTCAGCTTCTGGAATCTCTTATTACCGATCCGACTTGCAGCCACCGAAGCCTCCTGATGTGTTCCTTTTGACGTTTTGCTGTCGCGATCGAAAAGGGCTATTACATGATGTTACAGAGGTTCTTTGTGAGCTGGAGCTTACGATAAAAAAAGTGAAGGTATCCACTACACCTGATGGCAAAGTGATGGATCTGTTTTTCATCACAGATACCAGGGAACTTATGCATACAAAGAAGAGAAAGGATGATACAATTGAACAGTTGAAAGATATTTTGGAGGATGCCATCATTAGTATTGACATTGAATTGGTTGGCCCGGAAATTACTGCTTGTTCCCAGGCATCTTCATTCCTTCCACCTGCAATCACAGATGATGTCTTTGATTTGGAATTGCCTGATTTGGTTCGTAGTGGAACTCTCAGATCAGATTATGTGTCTATCACAATGGACAACATGCTTAGTCCTGCACATACCCTTGTCCAAATTATGTGCCAAGACCACAAAGGTCTTCTTTATGACATCATGAGAACTCTAAAGGACTACAACATTCAGATTTCCTATGGGCGTTTCACTACAAAACCTAGAGGGAAATGTGAGATTGACTTATTCATCATGCAAGCCGATGGAAAAAAAATAGTTGATCCCAACAAGCAGAGTTCTTTGTCATCACGCCTTCAAATGGAACTACTTCGTCCACTCAGAGTAACAGTTGTGAGCAGAGGCCCTGATACTGAGCTTTTGGTTGCAAACCCTGTGGAGTTGTCTGGCAAGGGAAGGCCTCTAGTTTTTTATGACATTACTCTTGCTCTCAAAATGCTTGGCATTTGCATCTTTTCGGTAATTACTGCTCTACTTCATGCTTCTTTGACTAGCTCAGCTGAAATCAAGAGACATGTGATTGGAGACCGCGAGTGGGAGGTTTATAGAATCTTGCTTGATGAAGGGGAGGGGTTGTCTGTTCCAAGGAACAAGATTAGGGAGGGAGTTTGGAAAATGCTGATGGGTTGGGAGTAA 1278 0.4327 MGILYDDVVIIREPEKEGDPTVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFWVVGKQKTRWSLLKKRLVGACPSCSSASGISYYRSDLQPPKPPDVFLLTFCCRDRKGLLHDVTEVLCELELTIKKVKVSTTPDGKVMDLFFITDTRELMHTKKRKDDTIEQLKDILEDAIISIDIELVGPEITACSQASSFLPPAITDDVFDLELPDLVRSGTLRSDYVSITMDNMLSPAHTLVQIMCQDHKGLLYDIMRTLKDYNIQISYGRFTTKPRGKCEIDLFIMQADGKKIVDPNKQSSLSSRLQMELLRPLRVTVVSRGPDTELLVANPVELSGKGRPLVFYDITLALKMLGICIFSVITALLHASLTSSAEIKRHVIGDREWEVYRILLDEGEGLSVPRNKIREGVWKMLMGWE. 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05308 425 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Seca8g05308 425 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 9 413 IPR040217 -
Seca8g05308 425 SUPERFAMILY ACT-like 244 295 IPR045865 -
Seca8g05308 425 Gene3D - 108 192 - -
Seca8g05308 425 SUPERFAMILY ACT-like 107 182 IPR045865 -
Seca8g05308 425 SUPERFAMILY ACT-like 18 81 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05308 Seca-Chr8 143644640 143648789 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05308 - - gmx:100789465 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05308 8 143644640 143648789 Seca8g05308 8 143644640 143648789 ECH
Seca8g05308 8 143644640 143648789 Seca2g04687 2 133023344 133027198 PCT