Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04687 ATGGGCATACTACAGGACGATGTGGTTCTTATCAGGCCTCCAGAGAAAGAAGGTGAAACCACAACCGTCATCACTGTGAATTGCCCTGACAAGACTGGTTTAGGTTGTGATTTGTGTCGCATCATACTCTTCTTTGGTCTTAGCATTGTCCGAGGAGACGTATCAACTGATGGGAAATGGTGCTACATAGTTTTCTGGGTGGTGGGGAAACAGAAAACTAGGTGGAGTTTGTTAAAGAAGAGGCTAATTGAGGCATGCCCTACTTGTTCCTCAGCTTCTGGAATTTCTTATTACAACAATTTGCAGCCGTCAAAGCCACCCGATGTGTTCCTTTTGAAATTTTGTTGCTATGATCGTAGAGGCCTTTTACATGATGTCACAGAGGTTCTTTGTGAGCTAGAGCTTACCATAAAGAAAGTGAAGGTATCTACTACACCAGATGGAAAAGTGGTGGATCTGTTTTTCATCACGGATACCAGGGAGCTTCTACATACAAAGGATAGAAAGAATGACACGATTGAGCAGTTAACAGCCATTATGGAGGATGTCTTAATTACCATTGACATTGAATTGGTTGGCCCAGAGATCACTGCTTGTTCTCAAGCGTGTCCATTCCTTCCAAATGCAATCACAGAAGATTCCTTTGATTTGGAAAGTGGGACTTCCACATCAGATTCTGTTTCTATTGTGATGGACAACACGCTGAGTCCTGCTCACACGCTCGTCCAAATTATGTGCCAAGATCACAAAGGTCTTCTTTATGACATCATGAGAACTCTGAAGGAATACAATATTCAGATTTCTTATGGGCGATTCTCAACGAAACCTAGAGGAAAATGTGAGCTTGACTTGTTCATCATGCAATCAGATGGGAAAAAAATAGTTGATTCCAACAAGCAGAAATCTTTGTCATCACGCCTTAGGATGGAACTACTCCGTCCACTCAAAGTAGCTGTTGTGAGCAGAGGACCTGATACAGAGCTACTGGTTGCAAACCCTGTGGAGTTGTCTGGCAAAGGACGGCCTCTTGTTTTTCATGATATCACTCTTGCTCTCAAAATGCTTGATCTTTGCATCTTTTCGGCTGAAGTTAGAAGACATGTGATTGGAGACCGCGAATGGGAAGTATATAGATTCTTGCTTGATGAAGGGGAGGGTTTATCTGTTCCAAGGAACAAGATTGAGAAAGGTGTTTGGAAAATTTTGATGGGTTGGGAGTGA 1221 0.4259 MGILQDDVVLIRPPEKEGETTTVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFWVVGKQKTRWSLLKKRLIEACPTCSSASGISYYNNLQPSKPPDVFLLKFCCYDRRGLLHDVTEVLCELELTIKKVKVSTTPDGKVVDLFFITDTRELLHTKDRKNDTIEQLTAIMEDVLITIDIELVGPEITACSQACPFLPNAITEDSFDLESGTSTSDSVSIVMDNTLSPAHTLVQIMCQDHKGLLYDIMRTLKEYNIQISYGRFSTKPRGKCELDLFIMQSDGKKIVDSNKQKSLSSRLRMELLRPLKVAVVSRGPDTELLVANPVELSGKGRPLVFHDITLALKMLDLCIFSAEVRRHVIGDREWEVYRFLLDEGEGLSVPRNKIEKGVWKILMGWE. 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04687 406 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Seca2g04687 406 SUPERFAMILY ACT-like 107 182 IPR045865 -
Seca2g04687 406 SUPERFAMILY ACT-like 238 291 IPR045865 -
Seca2g04687 406 SUPERFAMILY ACT-like 20 82 IPR045865 -
Seca2g04687 406 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 17 394 IPR040217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04687 Seca-Chr2 133023344 133027198 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04687 - - gmx:100797226 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04687 2 133023344 133027198 Seca2g04687 2 133023344 133027198 ECH
Seca8g05308 8 143644640 143648789 Seca2g04687 2 133023344 133027198 PCT