Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05286 ATGTCTGGCCCTGTGGCCACAGTTGGTAATTTGGATGGAGCACTTTCTTGTGCAGAGAGAACAAAATCTCTTGATGCAATTTCTAAAATAGATGGTATATCTATATTGACAAATGGTGAAGCTGACCATTCCTCTGAAATTGCTGGCTTCAGAGTTGGGGAACTCTTACTTTCTAATGGAGAATCATACTATGGGTCCCTTCATGGCAACATTCCAGAGGGTCATGGTAAATATGTATGGTCAGATGGTTGTGTATATGAGGGTGAGTGGAGACGGGGGATGAGAACTGGAATTGGGAAAATACAATGGCCTTCTGGAGTAGTGTATGAGGGTGAATTTGCTGGTGGCTATATCCATGGCACAGGAACATTTATTGGCCCCAATAATCTGACCTACAAAGGTCGGTGGAGATTGAATCTAAAACATGGGCTAGGCTATCAAGTTTATGCAAATGGAGATATCTTTGAAGGCTCTTGGATCCAAGGAACACCAGAGGGGCCAGGCAAGTATACCTGGGCCAATGGAAATGTATATTTGGGGAATATGAAAGGTGGGAAAATGTCAGGAAAAGGAACTCTCACCTGGGTAAACGGAGACTCATTTGAAGGAAGCTGGTTAAATGGAATGATGCATGGGCTTGGGGTATATACTTGGAGTGATGGAGGCTGCTATGTTGGGACTTGGACACGGGGTCTGAAAGATGGCAAAGGTACCTTTTATCCAAAAGGCAGCTGTCTTCCATCTGCACAAGAAATATATCTCAATGCATTGAGAAAAAGAGGACTATTGCCAGATTTGAGAAAACAAAACCAGATGGGAGATGTCAAGGTTGGTGAGAACCAGAGATCAAGTCGAGTTTCATCTGATAAGCTTGCCAAAGGAAGCCTATTAAATCTGGAACAATCTCGCAGCAAAAATATTTCTCTTGAAAGGCGCTGGAGTCTTGAGGTATCTATTGAGAAAGTGATTGGGCATGATTCAAACTTAGGTTCAACAGATTCTGTTCGAGAAAGTGGAGATAAAGATGTTAATGCAAAGATCCCAATTTTGGAACGTGAGTATATGCAAGGTGTATTAATAAGTGAGCTAGTTTTAAATAATAGTTTTTCATCATTGTCTAGAAGAGCAAAACAGCTTCAAAAAAAACTTGCTAAAGAGATTAAAAGACCTGGTGAAGCAATCATTAAAGGTCACAGGAGTTATGATCTGATGCTTAGCTTGCAGCTTGGAATAAGGTATACTGTGGGAAAGATTACCCCCATACAGAGACGAGAAGTTCGAGCATCAGATTTTGGTCCCAAAGCAAGCTTTTGGATGAATTTTCCTAAAGAAGGCTCTCAATTGACGCCTCCTCATCAGTCAGAGGATTTTAAATGGAAGGATTATTGCCCGATGGTGTTCAGAAATTTGAGAGAGTTGTTTAAGATTGATGCTGCTGACTATATGATGTCCATTTGTGGAAATGATGCTCTGAGGGAACTATCTTCTCCAGGGAAAAGTGGCAGTGTCTTTTTCCTGTCTCAGGATGATCGTTTCATGATCAAGACACTGAGAAGATCTGAAGTAAAGGTTCTTCTAAGAATGCTTCCAGACTATCATCATCATGTGAAGTCATATGAGAATACACTCATCACAAAATTTTTTGGTCTGCACAGGATTACACCTTCAAGTGGTCAAAAGTTTCGCTTTGTTGTAATGGGAAATATGTTCTGCACCGAATTAAGGATCCATAAGAGGTTTGATTTAAAAGGTTCATCCCTTGGACGATCTTCGGACAAGATAGAAATTGATGAGAATACCACTCTTAAAGATTTGGATCTGAATTACTGCTTTTACTTGGAACCGTCTTGGCGGGAATCTTTATTAAAGCAAATTGAGATTGACAGCAAGTTCTTGGAAGTACAGCACATAATGGATTACAGCCTCCTTCTAGGTGTTCATTATCGAGCTCCTCAGCAGCTGCGTCCTCTCACGTCCTACAATCAAAGTATAAGTGCGGATGGATTGGCAATGCTTGCAGAGGAAGACCCTCTAGAGGATGAAGTATCCAACTATCCACAAGGCCTTGTTCTGGTCCCTCGTGGAGCAGATGATAGTAGTGTTGTTGTAGGGTCACACATAAGGGGTAGCCGATTGCGAGCTTCAGCTGCTGGTGATGAGGAGGTAGATCTACTTCTACCCGGTACAGCAAGGTATAGTTTCTTCATGATTTTAATGATTATGTTAATATTATTTATCATTTTTAACATCACATAG 2256 0.4113 MSGPVATVGNLDGALSCAERTKSLDAISKIDGISILTNGEADHSSEIAGFRVGELLLSNGESYYGSLHGNIPEGHGKYVWSDGCVYEGEWRRGMRTGIGKIQWPSGVVYEGEFAGGYIHGTGTFIGPNNLTYKGRWRLNLKHGLGYQVYANGDIFEGSWIQGTPEGPGKYTWANGNVYLGNMKGGKMSGKGTLTWVNGDSFEGSWLNGMMHGLGVYTWSDGGCYVGTWTRGLKDGKGTFYPKGSCLPSAQEIYLNALRKRGLLPDLRKQNQMGDVKVGENQRSSRVSSDKLAKGSLLNLEQSRSKNISLERRWSLEVSIEKVIGHDSNLGSTDSVRESGDKDVNAKIPILEREYMQGVLISELVLNNSFSSLSRRAKQLQKKLAKEIKRPGEAIIKGHRSYDLMLSLQLGIRYTVGKITPIQRREVRASDFGPKASFWMNFPKEGSQLTPPHQSEDFKWKDYCPMVFRNLRELFKIDAADYMMSICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRRSEVKVLLRMLPDYHHHVKSYENTLITKFFGLHRITPSSGQKFRFVVMGNMFCTELRIHKRFDLKGSSLGRSSDKIEIDENTTLKDLDLNYCFYLEPSWRESLLKQIEIDSKFLEVQHIMDYSLLLGVHYRAPQQLRPLTSYNQSISADGLAMLAEEDPLEDEVSNYPQGLVLVPRGADDSSVVVGSHIRGSRLRASAAGDEEVDLLLPGTARYSFFMILMIMLILFIIFNIT. 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05286 751 SMART PIPK_2 427 741 IPR002498 GO:0016307|GO:0046488
Seca8g05286 751 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 386 568 IPR027484 -
Seca8g05286 751 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 72 695 IPR023610 -
Seca8g05286 751 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 486 663 IPR002498 GO:0016307|GO:0046488
Seca8g05286 751 Pfam MORN repeat 201 222 IPR003409 -
Seca8g05286 751 Pfam MORN repeat 86 106 IPR003409 -
Seca8g05286 751 Pfam MORN repeat 178 199 IPR003409 -
Seca8g05286 751 Pfam MORN repeat 63 85 IPR003409 -
Seca8g05286 751 Pfam MORN repeat 132 153 IPR003409 -
Seca8g05286 751 Pfam MORN repeat 155 177 IPR003409 -
Seca8g05286 751 Pfam MORN repeat 224 244 IPR003409 -
Seca8g05286 751 Pfam MORN repeat 109 129 IPR003409 -
Seca8g05286 751 CDD PIPKc_AtPIP5K_like 400 652 - -
Seca8g05286 751 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 397 751 IPR002498 GO:0016307|GO:0046488
Seca8g05286 751 PIRSF PIP5K_plant 9 737 IPR017163 GO:0005524|GO:0016308
Seca8g05286 751 Coils Coil 369 389 - -
Seca8g05286 751 SUPERFAMILY SAICAR synthase-like 396 660 - -
Seca8g05286 751 FunFam Phosphatidylinositol 4-phosphate 5-kinase 386 568 - -
Seca8g05286 751 Gene3D - 52 114 - -
Seca8g05286 751 Gene3D - 115 161 - -
Seca8g05286 751 Gene3D - 162 206 - -
Seca8g05286 751 Gene3D - 207 248 - -
Seca8g05286 751 Gene3D - 569 687 - -
Seca8g05286 751 SMART morn 130 151 IPR003409 -
Seca8g05286 751 SMART morn 153 174 IPR003409 -
Seca8g05286 751 SMART morn 107 128 IPR003409 -
Seca8g05286 751 SMART morn 84 105 IPR003409 -
Seca8g05286 751 SMART morn 199 220 IPR003409 -
Seca8g05286 751 SMART morn 222 243 IPR003409 -
Seca8g05286 751 SMART morn 176 197 IPR003409 -
Seca8g05286 751 SMART morn 61 82 IPR003409 -
Seca8g05286 751 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 58 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05286 Seca-Chr8 143479663 143487943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05286 10 731 Acyl Lipid Metabolism Gene Families AT3G09920 75.069 0.0 1133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05286 K00889 - gmx:100805371 1347.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05286 8 143479663 143487943 Seca8g05286 8 143479663 143487943 ECH
Seca8g05286 8 143479663 143487943 Seca2g04705 2 133209395 133211431 PCT