Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04705 ATGGATTATAGCCTTCTTCTTGGTGTTCACTATCGAGCTCCTCAGCATATGCGTACTCCCATGTCATACAACCAGAGTATAGGTACAGATGGATTAGCAATGCTTGCAGAGGAAGATCCTTTGGAGGATGAAGTATTCAACTATCCACAAGGCCTTGTTCTGGTTCCTCGAGGAGCAGATGATAACAGTGTTGTTGTGGGCTCACACATGAGGGGTAGCCGGTTAAGAGCTTCATCTGCTGGTGATGAGATTGTGGATCTGCTTCTACCTGGTACAGCAAGACTCCAAATTCAGCTTGGAGTGAACATGCCATCAAGGGCAGAGCAAATTCCAGGAAAACAAGAAAAGCAAATGTTTCATGAGGTGTACGATGTGGTACTATACCTGGGTATCATTGACATATTACAAGACTACAACATGAGTAAGAAGATTGAACATGCCTATAAATCTCTCCACTTTGATTCATTGTCTATCTCAGTTGTGGACCCTACGTTCTACTCTCGTCGCTTCCTGGAGTTTATTCAGAAAGTGTTTCCACCAAATGCAATTACAGGTTAA 558 0.4319 MDYSLLLGVHYRAPQHMRTPMSYNQSIGTDGLAMLAEEDPLEDEVFNYPQGLVLVPRGADDNSVVVGSHMRGSRLRASSAGDEIVDLLLPGTARLQIQLGVNMPSRAEQIPGKQEKQMFHEVYDVVLYLGIIDILQDYNMSKKIEHAYKSLHFDSLSISVVDPTFYSRRFLEFIQKVFPPNAITG. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04705 185 Gene3D - 1 183 - -
Seca2g04705 185 SMART PIPK_2 2 179 IPR002498 GO:0016307|GO:0046488
Seca2g04705 185 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1 178 IPR002498 GO:0016307|GO:0046488
Seca2g04705 185 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1 176 IPR002498 GO:0016307|GO:0046488
Seca2g04705 185 SUPERFAMILY SAICAR synthase-like 1 178 - -
Seca2g04705 185 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 1 178 IPR023610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04705 Seca-Chr2 133209395 133211431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04705 1 181 Acyl Lipid Metabolism Gene Families AT3G09920 71.585 6.78e-87 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04705 K00889 - pcin:129295615 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04705 2 133209395 133211431 Seca2g04705 2 133209395 133211431 ECH
Seca8g05286 8 143479663 143487943 Seca2g04705 2 133209395 133211431 PCT