Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05248 ATGAGTAGTAGTAGTGGAGCTAAATCTAAATGGAATTGTTGTCCATGCCGTCCTTCCATAGCATCATCTTCCATTAAGCTCTTGTTGTCCATGGTTCCTCTCATCCTTGTTGCTGCCCTTGTTTCTGTTCACTATCCAACCTTCTGCACCACCTGCGACAAGGATTTTATTGGAAAAGGAAAACGTCCTTTCTCTAATTCCCCCTCTGTTACTCCTCCTCCTTCTTCCTCATTGTTAGATGCCAAACAGAGAGAACAGCTTCTGGATTTGAAGTCGGGAGCGGTGGTGGAAGTGGATAATGCGAAAGCTATGCACATTGCCTTTAATCATTCCTCTAATCCTCTTCTCTCCACACCAACACTTCAACAATCTAATGAAACTGTTCCCAAAGTCTCTGACCCTTGGCCTAATATGTCTCCTGTGAATGAATCTTACCCACCTCAGCTGAGAAAGAAGCAGCCAAAAAAGTTCAGCATCTTAGACAAAACCGAAGCTGGTCTACTGCAAGCTCGAGCGGCTATTAGAGAAGCCAGAAACATGAATCAAATGCAAGATCCAGATTATGTTCCAGTCGGACCAATGTATTGGAATGCTAAGGCATTTCACAGGAGCTACTTAGAAATGGAGAAACAGTTCAAAGTATTTGTCTACGAAGAAGGGGAGCCTCCAGTTTTTCACAATGGACCTTGCAAAAGCATATACTCCATGGAGGGGAACTTCATCCATGCTATTGAGATGAATGACAAATTTCGAACAAGAGATCCTGAGAAAGCACATGTTTTTTTCCTCCCTTTTAGTGTAGTAATGTTGGTCCGGTTTGTGTATGTAAGGGACTCCCATGATTTTAGCCCCATAAAAAAAACTGTCACGGATTATGTCAATGTCATTGCTGGAAGATATCCCTATTGGAACAGAAGCCTTGGAGCTGATCATTTCATGCTTGCTTGCCATGACTGGGGGCCAGAGACTTCATTTTCTGTACCTTACCTGCACAAGAACTCTATTCGTGTGCTTTGCAATGCCAACACCTCAGAAAGATTCAACCCTGCAAAGGATGTTTCTTTCCCTGAAATTAACCTCCAAACTGGTTCAATAAACGGTTTCCTAGGTGGGCCATCTGCATCTACACGTTCAGTTTTGGCTTTCTTTGCTGGAGGGCTTCATGGTCCTATAAGGTCTGTTCTTCTTGAGCATTGGGAAAACAAGGATCAAGATATTCAGGTTCGCAAGTATCTTCCAAAAGGTGTTTCATACTATGGGATGCTGAGGAAGAGCAAGTTCTGTCTCTGCCCAAGTGGGTATGAGGTGGCTAGCCCCAGAGTGGTGGAGGCAATATACACAGGGTGTGTTCCAGTGCTCATTTCAGAACATTATGTCCCTCCATTCAGTGACGTTTTGAATTGGAAGTCTTTCTCAGTTGAGCTTTCAGTGAAAGACATTCCCAACTTGAAGCAAATTCTGATGAGTATTTCTCCAAGGCAGTATATAAGAATGCAGAGAAGGGTAGGACAAATTAGGAGACACTTTGAGGTGCATTCTCCCCCTAAGCGTTTCGATGTGTTCCATATGATCCTTCATTCTGTATGGCTTAGAAGATTGAACTTTAGACTCCATGATGATCACTAG 1626 0.4323 MSSSSGAKSKWNCCPCRPSIASSSIKLLLSMVPLILVAALVSVHYPTFCTTCDKDFIGKGKRPFSNSPSVTPPPSSSLLDAKQREQLLDLKSGAVVEVDNAKAMHIAFNHSSNPLLSTPTLQQSNETVPKVSDPWPNMSPVNESYPPQLRKKQPKKFSILDKTEAGLLQARAAIREARNMNQMQDPDYVPVGPMYWNAKAFHRSYLEMEKQFKVFVYEEGEPPVFHNGPCKSIYSMEGNFIHAIEMNDKFRTRDPEKAHVFFLPFSVVMLVRFVYVRDSHDFSPIKKTVTDYVNVIAGRYPYWNRSLGADHFMLACHDWGPETSFSVPYLHKNSIRVLCNANTSERFNPAKDVSFPEINLQTGSINGFLGGPSASTRSVLAFFAGGLHGPIRSVLLEHWENKDQDIQVRKYLPKGVSYYGMLRKSKFCLCPSGYEVASPRVVEAIYTGCVPVLISEHYVPPFSDVLNWKSFSVELSVKDIPNLKQILMSISPRQYIRMQRRVGQIRRHFEVHSPPKRFDVFHMILHSVWLRRLNFRLHDDH. 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05248 541 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 114 528 IPR004263 GO:0006486|GO:0016757
Seca8g05248 541 Pfam Exostosin family 209 490 IPR040911 -
Seca8g05248 541 MobiDBLite consensus disorder prediction 125 151 - -
Seca8g05248 541 MobiDBLite consensus disorder prediction 125 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05248 Seca-Chr8 142947677 142951568 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05248 - - gmx:100806278 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05248 8 142947677 142951568 Seca8g05248 8 142947677 142951568 ECH
Seca8g05248 8 142947677 142951568 Seca2g04739 2 133639375 133643155 PCT