Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04739 ATGGGTAGTGGTAGAAACAGTTATTGTGGTGCATGGCGGGGTTCTTCAGAGTCATCTTCATCTATGAAGCTCTTGTTGTTCATGATGCCTCTCATAGTGGTTGCAGGGCTTATTTCTTTGATGGGTCCAAATTACCCCTATACAAGTTGGGTTCTTATTCCGAACCCACCTATTTTATGGAGCTCTGGTACCCCCTCTGCCTCAAACAATGGTGCTGCTTCTGTGGCCACTATGGAAGCCTCAACTGTTTCATCTGATATGAAACAGAAAGAAGGGCTAGTGGTTATGGCTGTGGATCTTCATGGTAAGGAAGAGAAAGCTATTATCTCTGATGACTCTGCTTTCAATCACTCCTCTACTCCTCCACTTTCCATTCAGGCCATTCAAACACCTCAACAATTTAACAAAGATGAAGAAAATCTCAATGTCTCCCAAATTTGGCCCAACATGGCTCTTGTGAATGAATCTGATATTCCTCTAGATAGACCAAAGCAGCCAAGAAAGTTCAGCATCTTGGATAGAACAGAAGCTGGTCTACTTCAAGCTCGTGCTGCAATAAGAGAAGCAAGAAATGGGAATCAATCACAAGATATAGATTACCTTCCACTAGGACCAATGTATCATAATGCTAATGCATTTCACAGGAGCTACTTAGAAATGGAGAAACAGTTCAAAGTATTTGTATATGAAGAAGGGGAGCCTCCAGTTTTCCATAATGGACCTTGCAAAAGCATATACTCCATGGAGGGAAATTTCATCCATGCTATTGAGATGAATGAACAATTCAGAACAAGGGACCCTGAGAAAGCACATGTATTTTTCCTACCTTTTAGTGTAGCAATGTTGGTCCAATTTGTGTATGTACGTGACTCTCATGATTTTGGCCCCATAAAGAAAACTGTCACGGATTACATCAATGTCATTGGTGGAAGATATCCTTATTGGAACCGTAGTCTTGGAGCTGATCACTTCATGCTTTCTTGCCATGACTGGGGGCCAGAGACTTCAAAATCTGTTCCTAGCTTGCACAAGAATTCAATTCGTGTGCTATGTAATGCTAACACCTCTGAGGGATTCAGGCCTTCAAAGGATGTATCATTTCCAGAAATCAATCTTCAAACTGGTTCAATACATGGTTTCATTGGTGGCCCATCTGCATCTAGGCGTTCAGTTTTGGCTTTCTTTGCTGGGGGGGTTCATGGTCCTATTAGGCCTGTTCTTCTTGAACATTGGGAAAAAAAAGATGAAGACATTCAGGTTCACAAGTACCTTCCAAAGGGTGTGTCCTATTATGATATGCTGAGGAAAAGCAAGTTCTGTCTTTGCCCAAGTGGGTATGAAGTAGCAAGTCCAAGAGTTGTGGAGGCAATCTACACAGGTTGTGTCCCAGTTCTGATTTCAGATCATTATGTGCCTCCATTCAGTGATGTCTTGAATTGGAAATCATTCTCTGTTGAGGTTCAAGTGAAGGATATTCCTAGGTTGAAGCAAATTCTGTTGAGTATTTCTCCAAGGCAATATATAAGAATGCAGAGAAGAGTGGGACAGGTTAGGAGACACTTTGAGGTGCATTCTCCTCCTAAGAGATTTGATGTGTTCCATATGATCCTTCATTCTGTATGGCTTAGAAGATTGAATTTCAGAATTCATGATGATCAATAA 1662 0.414 MGSGRNSYCGAWRGSSESSSSMKLLLFMMPLIVVAGLISLMGPNYPYTSWVLIPNPPILWSSGTPSASNNGAASVATMEASTVSSDMKQKEGLVVMAVDLHGKEEKAIISDDSAFNHSSTPPLSIQAIQTPQQFNKDEENLNVSQIWPNMALVNESDIPLDRPKQPRKFSILDRTEAGLLQARAAIREARNGNQSQDIDYLPLGPMYHNANAFHRSYLEMEKQFKVFVYEEGEPPVFHNGPCKSIYSMEGNFIHAIEMNEQFRTRDPEKAHVFFLPFSVAMLVQFVYVRDSHDFGPIKKTVTDYINVIGGRYPYWNRSLGADHFMLSCHDWGPETSKSVPSLHKNSIRVLCNANTSEGFRPSKDVSFPEINLQTGSIHGFIGGPSASRRSVLAFFAGGVHGPIRPVLLEHWEKKDEDIQVHKYLPKGVSYYDMLRKSKFCLCPSGYEVASPRVVEAIYTGCVPVLISDHYVPPFSDVLNWKSFSVEVQVKDIPRLKQILLSISPRQYIRMQRRVGQVRRHFEVHSPPKRFDVFHMILHSVWLRRLNFRIHDDQ. 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04739 553 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 20 540 IPR004263 GO:0006486|GO:0016757
Seca2g04739 553 Pfam Exostosin family 221 500 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04739 Seca-Chr2 133639375 133643155 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04739 - - gmx:100806278 905.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04739 2 133639375 133643155 Seca2g04739 2 133639375 133643155 ECH
Seca8g05248 8 142947677 142951568 Seca2g04739 2 133639375 133643155 PCT