Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05090 ATGTCGGTGAAGGAGTGCGAGCACCACAAGGGGAAGAAGAGAAAGATCTTCCGGCGAATATTCTGGGGCATCATCGTCTTCCTCTTCATCGTCCTGGTAACAATCCTTATCATATGGGCCGTTCTAAGGCCCACGAAGCCCACCTTCATCCTCCAAGACGTAACCGTTTACGCCTTTAACGCCACCGTACCAAACTTCTTAACCACCAACTTCCAAGTCACACTCTCTTCTCGCAACCCAAACGATCACATCGGTGTCTACTATGACCGTCTCGACACCTACGTCACTTACCGGAGCCAGCAGGTAACCTACCGCACCGCCATCCCTCCCTCCTATCAAGGCCACAAAGAATTCGACGTTTGGTCACCGTTTGTCTACGGCACCAACGTCCCCGTCGCGCCTTTCAACTTCGTCGGCCTCACACAGGACCAGTCTACCGGCAACCTCATCGTCACCGTTAAAATTGACGGCAGAGTCCGTTGGAAGGTTGGCGCCTTTATCTCCGGCCGTTACCACCTCTATGTCCGCTGTCCCGCGTTCATATCCTTGGGTCCACGCAGTAACGGCATCGTCGTCGGGGAAAACGCCGTTAAGTATCAGTTAATCCAGCGATGCTCCGTTAGCGTTTGA 630 0.5349 MSVKECEHHKGKKRKIFRRIFWGIIVFLFIVLVTILIIWAVLRPTKPTFILQDVTVYAFNATVPNFLTTNFQVTLSSRNPNDHIGVYYDRLDTYVTYRSQQVTYRTAIPPSYQGHKEFDVWSPFVYGTNVPVAPFNFVGLTQDQSTGNLIVTVKIDGRVRWKVGAFISGRYHLYVRCPAFISLGPRSNGIVVGENAVKYQLIQRCSVSV. 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05090 209 Pfam Late embryogenesis abundant protein 74 177 IPR004864 -
Seca8g05090 209 PANTHER OS05G0367900 PROTEIN 18 206 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05090 Seca-Chr8 140737126 140737755 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05090 - - gmx:100788592 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05090 8 140737126 140737755 Seca8g05090 8 140737126 140737755 ECH
Seca8g05090 8 140737126 140737755 Seca2g04897 2 135444690 135451799 PCT