Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05070 ATGACCATGAATATTGAGCCAACAACAACAATGGTGCAAGTAAACAAGGCTGGACTTTTTGGTCATTGGTGGGACTGCATCAAGGCTTTGCCAGGGAACTCCAAGTCCAAGATTATAAATGTGACAAGGAGTATAAAGAAGATTGGACAAGATGACCCCAGACGAGTGATTCACTCACTAAAAGTGGGAATTGCTCTCACATTAGTATCCTTACTTTACTACTGGAGGCCTCTTTATAATGGCTTTGGAGTTGCAGGAATGTGGGCTGTGCTCACAGTTGTGGTGGTATTTGAATTCACCGTAGGTGCAACCCTCAGCAAAGGTTTAAATAGAGGATTTGCTACACTATTAGCTGGTGCTTTAGGGATTGGAGGTCAACACCTGGCCACTGTTTTCGGCCAAAGAGGAGAACCTATTGCCCTTGGAGTCCTTGTCTTCATTCTAGGCACGTCTGCAGGGTCTACATTTTTCAGATTTTTCCCGAAGATTAAGGCAAGGTATGATTATGGGGTGATGATATTTATATTGACATTCAGTTTGGTTACCGTCTCGGGGTACAGGGTGGAACAATTGTTGGAGCTTGCTCATCAGAGGCTTTCAACAATTTTAATAGGAGGAGCAACCTGCATGGCCATTTCCTTGTTCGTTTGTCCAGTTTGGGCAGGTGAAGACCTTCACAAGTTGCTTGCTTCCAACATAGAAAAGCTAGCAATTTACTTACAAGGATTTGAAGGTGAATATTTTCAAAGCAAACAAGATATAGAAAAAACTGAAAAGTCATTTCTCCAAGGTTATAAAAGTGTTCTCAATTCCAAGGCGACTGAAGAATCCTTGGCAAATTTGGCAAGGTGGGAACCAGGACATGGCCGATTTCGTTTTCATCATCCTTGGAAACAGTACTTGAAGATTGGGGCACTTGCCCGGGAATGTGCTTACAACATTGAAGCTCTCAATGGTTATGTCAACACTGAAATCCAAACATCTTTGTTGTTCAAGAGTGAAGTTAAAAAATCATGCACGAAGATGAGCTCAGAATCTAGCAAGGCGTTAAAAGCAATATCTTCATCCATCAAAACAATGACAGAACCATCTGCTGCTAAATTCCACATAGAGAACTCTAAAACTGCAATTGAGGAGCTTAAAATTGCATTGGAAACTGTTTGCTTAGAAGATGCAGAGCTTCTAGCTATAGTTCCAGTTGCCACAGTAGCATCCATACTTGTAGAAATCACCAAATCCGTGGAGAAAATTTATGAATCTGTTTCTGTTCTTTCAAATTTAGCTCATTTCAAGAGTAGTGTGGAACCTATTAATGTCTCACCAGAGAAGCCACCTTTGCTTCATAGAGGAATCATAAAACCTGTTGTTGACAATGTTGAAATTGTCATCCATGACATGAGTACGGACTCGCCAGAAAAGGAAAAATGCAGCCTCAAAATGTAA 1443 0.4103 MTMNIEPTTTMVQVNKAGLFGHWWDCIKALPGNSKSKIINVTRSIKKIGQDDPRRVIHSLKVGIALTLVSLLYYWRPLYNGFGVAGMWAVLTVVVVFEFTVGATLSKGLNRGFATLLAGALGIGGQHLATVFGQRGEPIALGVLVFILGTSAGSTFFRFFPKIKARYDYGVMIFILTFSLVTVSGYRVEQLLELAHQRLSTILIGGATCMAISLFVCPVWAGEDLHKLLASNIEKLAIYLQGFEGEYFQSKQDIEKTEKSFLQGYKSVLNSKATEESLANLARWEPGHGRFRFHHPWKQYLKIGALARECAYNIEALNGYVNTEIQTSLLFKSEVKKSCTKMSSESSKALKAISSSIKTMTEPSAAKFHIENSKTAIEELKIALETVCLEDAELLAIVPVATVASILVEITKSVEKIYESVSVLSNLAHFKSSVEPINVSPEKPPLLHRGIIKPVVDNVEIVIHDMSTDSPEKEKCSLKM. 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05070 480 Pfam Aluminium activated malate transporter 47 425 IPR020966 GO:0015743
Seca8g05070 480 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 34 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05070 Seca-Chr8 140404387 140407092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05070 13 465 Miscellaneous Gene Families AT3G11680 57.388 9.35e-179 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05070 K25841 - gmx:100170704 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05070 8 140404387 140407092 Seca8g05070 8 140404387 140407092 ECH
Seca8g05070 8 140404387 140407092 Seca2g04223 2 126482066 126486468 PCT