Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04223 ATGGAATCAACTCATGTAATATCAATTACTAATGGAGAAGGCAATATTGCTCCTATGAAGGAGCAAAAAACACTCCAATCTCCACTTCCACCCATTGTTTCCCATCTTAAGAAAAATGAAATTCACTTCTCTCATTCCCCAATTACTTCCTATCTTAGGGGCAAGAAGATGAAAAATGACCTTGACACTAGAAAATTGATTCACAGTATCAAAGTGGGAATCTCCCTGGTTTTGGTTTCACTCCTTTACATTTTGAATCCCCTGTTTGAGCAAGTTGGAGAAAATGCAATGTGGGCTATCATGACTGTAATTGTCATCTTTGAATTCTCTGCAGGAGCCACACTAGGAAAAGGCATCAATCGTGGAATAGGAACTATTGTAGGAGGAGCACTGGGTTGCATAGCAGCAGCTTTAGCCCAAAGCATTGGGGGGATTGGCAACTCAATCATAATTGGTACTTTAGTATTCATCTTTGGATCAGTTGCTACATATTTTCGATTGGTTCCAAGCATCAAGAATAGATATGATTATGGGGTGATGATATTGATGCTGACTTTCAATCTAGTTGTGGTGTCTGGCGTGCGTCCTGGTGTGAAAGTTTGGGAGCTAGCTCGGGAACGTTTCTTGACAATCCTAATGGGTTTCATTGTGTGCATTTGTGTGAGCTTGTTCGTTTTTCCTTTGTGGGCCAGCGATGAACTTCATGATTCCACAATCTCAAGATTCCACGAACTTGCCAATACAATTCAAGGTTGCTTAGAGGAATGTACCAAATTCATTGATGAAAGGGAAAACCAGCCACGTGCTAGCTTTTGTACGTTGGTGTTGAACTCCAAGTCAAAGGATGAATCATTGGCAAATTTCGCAAAATGGGAACCCTGGCATGGAAAATTTGGATTTTCCTACCCTTGGGACAAGTACTTAAAGATTGGAGAGGTTCTTCGAGAATTGGCTGCATTTATTCTTGCAGTGGGAAGCTGTCTCCAAGCCTCAAAACAGCCCATGGCATCTTTGAGGCAGTCAAAATCGGTCCAATTAAAGCTATGTGAGGCAATTGGGTCAAGGATTGCATTGACCCTGCGAGAACTTGGAGATAGCATGAAGCAAATGAGGAAGTGTGAAGCAGAGGGAAGCATTTTGGCTAAGTTGACAGCAGCTAGAGCAGAGCTAAGTTTGGTAATTTCCAAGTCCATGATAGCAGAACTTGAGAATAGCGAAGTGCTAGCAATTGCAAGCTTCGTGTTGTTGCTGAGAGGAGTGGTGGAAAAGGTTGAGGAATTGGTGAAAGAGGTATGGGAACTTGGAGATATGGCTGGTTTTCACAACCACATAACTCCAATGTCTTCTTAG 1350 0.4215 MESTHVISITNGEGNIAPMKEQKTLQSPLPPIVSHLKKNEIHFSHSPITSYLRGKKMKNDLDTRKLIHSIKVGISLVLVSLLYILNPLFEQVGENAMWAIMTVIVIFEFSAGATLGKGINRGIGTIVGGALGCIAAALAQSIGGIGNSIIIGTLVFIFGSVATYFRLVPSIKNRYDYGVMILMLTFNLVVVSGVRPGVKVWELARERFLTILMGFIVCICVSLFVFPLWASDELHDSTISRFHELANTIQGCLEECTKFIDERENQPRASFCTLVLNSKSKDESLANFAKWEPWHGKFGFSYPWDKYLKIGEVLRELAAFILAVGSCLQASKQPMASLRQSKSVQLKLCEAIGSRIALTLRELGDSMKQMRKCEAEGSILAKLTAARAELSLVISKSMIAELENSEVLAIASFVLLLRGVVEKVEELVKEVWELGDMAGFHNHITPMSS. 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04223 449 Pfam Aluminium activated malate transporter 62 431 IPR020966 GO:0015743
Seca2g04223 449 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 59 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04223 Seca-Chr2 126482066 126486468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g04223 62 394 Miscellaneous Gene Families AT5G46600 42.733 6.32e-84 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04223 K25841 - gmx:100779890 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04223 2 126482066 126486468 Seca2g04223 2 126482066 126486468 ECH
Seca8g05070 8 140404387 140407092 Seca2g04223 2 126482066 126486468 PCT