Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04975 ATGGCCAAATACGGCGAGGGCGACAAGCGGTGGATCGTGGAGGAGAGGCCCGACGGCACTAACGTCCACAACTGGCACTGGGCCGAAACTAACAGTCTCGAATGGTCCAGAACCTTCTTTAACAACCTCCTCAACAACCTCAACGTCCTCGACGGCAGCAACGGCGACCTCCACCTCACCATAAAGAACGTCGACAAGCTCGACGGCGAGGCCTACGTCAATATCCGCAAGGGGAAAATCATCCCCGGCTATGAAATTAGCCTCTCTCTCTCTTGGGAAGGTGAAGCCAAAGATTCAGAGGGAAAGATCTTGAACAAAGTCAACGGCACTGTTGAGATCCCTTACATTTCCGACGAGAACGCCGATGAGGACCCTGAGGTTAGGGTTATGGTGAAAGATGAAGGACCTATTGGGAAAAGATTGAAAGAAGCGATGGTTGCGAAGGGGAAACCGTTGATCTTGGATAAGGTTAGGGTTTGGGTGCAGAGCATGGCCAAAGGTGGACCTGTGAAGGATGATCTCGAGACAAAGAAGGTGGCGCCGCCGCAGAAGAATAATGATGTGGCAAAGAAGGAAAAGAAGGAGGTTGCGGCGGTGACGGCGGCGGCGGAGGAGAAGAAGAAAAAGAAAGAGGGGAAGAAGGGTTGTAAAACGATTAGTTTGACGGAGAAGTTTAACTGCAGGGCGAGGGATTTGTTTGAGATATTGATGGATGATAATAGGTGGAAGGGTTTCACGCAGAGCAATGCGAGGATTAGCAAGGAGGTTGATGGAGAGTTTAGCATCTTCGATGGGTCTGTAACGGGGAGGAATTTGGAGTTGCAGGAAGGCAAGTTGATTGTGCAGAAATGGAGGTTTGGGAGTTGGCCAGATGGGATGCAATCAAATGTGAGAATTGTGTTTGAGGAGCCTGAATCTGGAGTTACAATTGTTAAGCTCACACATACTGATGTGCCTGAAGAAGATAGGTTAGTGTTTGATTTATTTGTTTTGGAATCTTTGTTTTGCACAATTGAGTTATTGATGTGA 1029 0.4849 MAKYGEGDKRWIVEERPDGTNVHNWHWAETNSLEWSRTFFNNLLNNLNVLDGSNGDLHLTIKNVDKLDGEAYVNIRKGKIIPGYEISLSLSWEGEAKDSEGKILNKVNGTVEIPYISDENADEDPEVRVMVKDEGPIGKRLKEAMVAKGKPLILDKVRVWVQSMAKGGPVKDDLETKKVAPPQKNNDVAKKEKKEVAAVTAAAEEKKKKKEGKKGCKTISLTEKFNCRARDLFEILMDDNRWKGFTQSNARISKEVDGEFSIFDGSVTGRNLELQEGKLIVQKWRFGSWPDGMQSNVRIVFEEPESGVTIVKLTHTDVPEEDRLVFDLFVLESLFCTIELLM. 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04975 342 SMART Aha1_N_2 29 166 IPR015310 GO:0001671|GO:0051087
Seca8g04975 342 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 1 166 IPR015310 GO:0001671|GO:0051087
Seca8g04975 342 Pfam Activator of Hsp90 ATPase homolog 1-like protein 229 322 IPR013538 -
Seca8g04975 342 SUPERFAMILY Bet v1-like 218 324 - -
Seca8g04975 342 Gene3D - 18 179 IPR036338 -
Seca8g04975 342 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 166 IPR036338 -
Seca8g04975 342 Coils Coil 189 209 - -
Seca8g04975 342 Gene3D - 215 332 IPR023393 -
Seca8g04975 342 Pfam Activator of Hsp90 ATPase, N-terminal 30 166 IPR015310 GO:0001671|GO:0051087
Seca8g04975 342 CDD SRPBCC_Aha1 218 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04975 Seca-Chr8 138017017 138018590 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04975 K26216 - egr:104446028 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04975 8 138017017 138018590 Seca8g04975 8 138017017 138018590 ECH
Seca8g04975 8 138017017 138018590 Seca2g04146 2 124971338 124972914 PCT