Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g04146 ATGGCGAAATACGGCGAGGGCGACAAACGCTGGATCGTGGAGGAAAGACCCGACGGCACCAACGTCCACAACTGGCACTGGGCTGAGACTAACTGTCTAGAATGGTCTAGAACCTTCTTCACCAACCTCCTCTCCAATCTCCCAATCCTCCAAGGCGAAGCCAACCTCTTCATCAAAACGACATCGCTTCACAGCCTCGACGGCGAAGCCTACATCAACATCCGAAAGGGGAAAATCATCCCCGGCTACGAGATCAACCTCACACTTAATTGGGAAGGTGAAGCCAAAGACTCCGAAGGTGTTTCTTTGCTCAAAGTTAACGGCACCGTCGAAATCCCTTACATTTCCGATGAAAACGCCGATGAAGACCCTGACCTTAGGGTTACCGTTAACGATGAAGGACCAATCGGGAAGAGAATCAAGGACGCCATGGTTTCTAAGGGAAAGCCATTGATTTTGGAAAAGGTTAGGGTTTGGGTTCAGAGTATGGCTAAAGGAGGTCCTGTTAAGGAGGAGTTGGACACCAAGAAGCCATCGTCGGCGGCGCAGCCGAAACAGAATCACGCGACGGCGGCGGATGCTAAGAAGAACGGTGGTGGTTCGGTGGAGAAGAAGGAGAGCAAGAAGGGGAAAAAAGTTATTAGCTTGACGGAGAGGTTTAATTGTAGGGCTAAGGATTTGTATGAGATATTGATGGATGAGAATAGGTGGAAGGGTTTCACGCAGAGTAATGCGAGGATTAGCAAGGAGGTTGGTGGGGAGTTTAGTATTTTTGATGGGTCGGTTACTGGGACTAATTTGGAGTTGCAGGAAGCTAAGTTGATTGTGCAGAGATGGAGATTTGGGAGCTGGAATGATGGGGTTCAGTCTCAGGTGAGGCTTGTGTTTGAGGAGCCTGAACCAGGAGTTACTATTGTTAAGTTGACTCATACTGATGTGCCTGAAGAGGATAGGTATGGGAATGCTACTGTGGTGGAGAACACGGAGAGGGGATGGAGGGATCTTATTTTCCAAAGGATACGTGCTGTTTTTGGTTTTGGAATTTGA 1047 0.4871 MAKYGEGDKRWIVEERPDGTNVHNWHWAETNCLEWSRTFFTNLLSNLPILQGEANLFIKTTSLHSLDGEAYINIRKGKIIPGYEINLTLNWEGEAKDSEGVSLLKVNGTVEIPYISDENADEDPDLRVTVNDEGPIGKRIKDAMVSKGKPLILEKVRVWVQSMAKGGPVKEELDTKKPSSAAQPKQNHATAADAKKNGGGSVEKKESKKGKKVISLTERFNCRAKDLYEILMDENRWKGFTQSNARISKEVGGEFSIFDGSVTGTNLELQEAKLIVQRWRFGSWNDGVQSQVRLVFEEPEPGVTIVKLTHTDVPEEDRYGNATVVENTERGWRDLIFQRIRAVFGFGI. 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g04146 348 Pfam Activator of Hsp90 ATPase, N-terminal 29 165 IPR015310 GO:0001671|GO:0051087
Seca2g04146 348 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 165 IPR036338 -
Seca2g04146 348 MobiDBLite consensus disorder prediction 167 208 - -
Seca2g04146 348 SUPERFAMILY Bet v1-like 214 347 - -
Seca2g04146 348 SMART Aha1_N_2 29 165 IPR015310 GO:0001671|GO:0051087
Seca2g04146 348 CDD SRPBCC_Aha1 214 346 - -
Seca2g04146 348 Gene3D - 18 176 IPR036338 -
Seca2g04146 348 Pfam Activator of Hsp90 ATPase homolog 1-like protein 224 344 IPR013538 -
Seca2g04146 348 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 1 165 IPR015310 GO:0001671|GO:0051087
Seca2g04146 348 Gene3D - 211 347 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g04146 Seca-Chr2 124971338 124972914 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g04146 K26216 - gmx:100812897 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g04146 2 124971338 124972914 Seca2g04146 2 124971338 124972914 ECH
Seca8g04975 8 138017017 138018590 Seca2g04146 2 124971338 124972914 PCT