Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04950 ATGGGAGGTGGTGGCCGAGCCTCTGTTCGTCCTCAGCACAGAAAATCAGAGGGTGAATCTGCAGGGAAACGTGTCCCACATACAAAACCACCATTTAGTCTTAGCCAAGTGAAGAAGGCCATTCCACCACACTGTTTTAAGCGTTCCTTGATTCGCTCATTTTCCTATGTCATAATTGACCTCACCATAGCCTCAATTCTAGCTTATGTTGCTGTAAATTACTTTTCTACCCTTCCCCACAACCTCTCCCTTTTGGCATGGCCCCTTTATTGGGCCATCCAGGGCTCTGTCCTTACAGGGGTTTGGGTCATTGCACATGAGTGTGGTCACCATGCTTTCAGTGATTATCAATGGCTTGATGACTTGGTTGGACTTGTTCTTCATTCAAGTCTTTTAGTCCCTTATTTTTCATGGAAATATAGCCACCGACGCCATCACTCCAATACTGGTTCTCTTGAGCGTGATGAGGTTTTTGTGCCAAAGAGAAAATCTGGTATCAGTTGGTACTCTAAATATCTTAACAACCCACCAGGGAGGGTTCTCACACTAACTATCACACTCACCCTTGGCTGGCCACTTTACTTGCTTTTCAATGTCTCTGGCAGACACTATGATAGGTTTGCTTGCCACTATGATCCATATGGCCCCATTTACTCTGATCGTGAAAGGCTTCAAATTTATGTCTCAGATGCAGGGGTTCTTGCAGTGTTTTATGGGCTTTACCGTCTTGTTTTGGCCCATGGGATTGGTTGGGTTGTTTGTGTTTATGGTGTGCCATTGCTAGTGGTGAATGGGTTCTTGGTGTTGATCACTTTTTTGCAGCATACCCACCCTGCTTTGCCTCATTATGATTCCTCTGAGTGGGATTGGCTCAGAGGGGCATTGGCTACTGTGGACAGAGATTATGGAATTCTCAACAAGGTTTTGCATAACATAACTGATACTCATGTGGTGCATCACATGTTTTCCACAATGCCTCATTACCATGCAATGGAGGCAACAAAGGCTGTGAAACCGATTTTGGGAGATTATTATCACTTTGATGGGACTCCAATTTATAAGGCAATGTGGAGAGAGGCAAAGGAGTGTCTCTATGTTGAACCTGATGAAGGTAGCCAGGACAAAGGTGTTTACTGGTACAAAAATAAGCTGTAA 1155 0.445 MGGGGRASVRPQHRKSEGESAGKRVPHTKPPFSLSQVKKAIPPHCFKRSLIRSFSYVIIDLTIASILAYVAVNYFSTLPHNLSLLAWPLYWAIQGSVLTGVWVIAHECGHHAFSDYQWLDDLVGLVLHSSLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKRKSGISWYSKYLNNPPGRVLTLTITLTLGWPLYLLFNVSGRHYDRFACHYDPYGPIYSDRERLQIYVSDAGVLAVFYGLYRLVLAHGIGWVVCVYGVPLLVVNGFLVLITFLQHTHPALPHYDSSEWDWLRGALATVDRDYGILNKVLHNITDTHVVHHMFSTMPHYHAMEATKAVKPILGDYYHFDGTPIYKAMWREAKECLYVEPDEGSQDKGVYWYKNKL. 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04950 384 CDD Delta12-FADS-like 48 330 - -
Seca8g04950 384 MobiDBLite consensus disorder prediction 1 34 - -
Seca8g04950 384 MobiDBLite consensus disorder prediction 10 24 - -
Seca8g04950 384 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 19 383 IPR012171 GO:0016491
Seca8g04950 384 Pfam Domain of unknown function (DUF3474) 20 68 IPR021863 GO:0016717
Seca8g04950 384 Pfam Fatty acid desaturase 86 346 IPR005804 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04950 Seca-Chr8 137027057 137030974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04950 1 384 Lipid Metabolism Gene Families AT3G12120 75.521 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04950 K10256 - gmx:100780912 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04950 8 137027057 137030974 Seca8g04950 8 137027057 137030974 ECH
Seca8g04950 8 137027057 137030974 Seca2g04130 2 124674343 124680079 PCT