Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03164 ATGGGTTGGAGATACAAGGCTGGATTGTTCCTCATAGCTACTGTGGTTATCATATGGGTCACCTCGGCTGAAGTTACCCAGGATATTTTTATAGATTATAAGCAGCCATTTGCAGTGACATATCTTGGAGCTTCTCTTATGGTAGTTTACCTCCCAATAGCATTCATTAAGGACTGGTTCTATAACTTGCTTAAACACCGCTCTTCTAAAAGTGGAAAAGATACAGAAAGCGGGGATGTGTTTTCTGTCAAGAGTAGCTCTCCTCTCAAAGGCAATGGAGTGCAGAAAAAGATTGAAGTGGAACTGGGGGGTCTGGTTAAAAAAGATAGTGATTTAGACATTTCAACTCTTGCAGAAGTACAGCCATTGGTGGCTAAATATAATGATACTAATGTGCTAAAGATAGAGGAAGAACTTACTACAAAGGAAATTGCTACTTATGGATTTTACATTGCACCTATCTGGTTTATAACAGAGTATCTATCAAATGCTGCCCTTGCCCGCACAAGTGTTGCAAGTACAACAGTGTTATCGTCTACTTCAGGACTCTTCACTCTTTTCATTGGTGTATTAATGGGCCAAGACTCTTTAAATATAGCAAAAGTAGTTGCTGTCTTGGTCAGCATGGCTGGGGTTGCCATGACGACGCTGGGGAAAACTTGGGCTGCAGATGACTCGCAAATAAGTGCTTCTGGAAATGAGTTGTGTCTCTCAGGGAGAGGACGTGTGTTCGATCCCTTGGTAAATCCTGTGGGGGAGGTCCATACCATTTTGCTCCTAGTGCAAAGGGAGTTGGGATACCGGAGTGGACCATGCTCACGTGTGGCATTGTTCTGTGACTACCCCCCCCCCCCCAACTTTCCTAATGCTGGGAGTGAATTACCTAAGGGTATGTTTTTGATATTTGTGTTCAGCAATGGACAGCGGTCTCTTGTTGGTGATCTTTTTGGCCTTCTCTCAGCCGTGTCATATGGTCTATTTACAGTTCTTCTAAAAAAGTTTTCTGGTGAAGAAGGAGAACGGGTTGATGTGCAAAAGCTGTTTGGATATATTGGATTGTTTACACTTGTAGCACTATGGTGGCTCATCTGGCCATTGTCAGCCTTAGGAATTGAACCTAAGTTTACAATTCCCCACTCTGCCAGAGTGGATGAAGTGGTTCTTGCCAATGGATTTATTGGAAGTGTTCTCTCAGACTACTTCTGGGCACTCTGTGTTGTATGGACAACTCCTCTTGTGGCCACTTTGGGCATGTCACTCACTATTCCCCTTGCTATGTTGGCTGACATGGTGATCCATGGTCGGCATTATTCAGCATTATACATTCTTGGCTCAGCTCAGGTATTTGCAGGCTTTGTGATAGCTAATATTTCAGATTGGATGACAAAGAAGTTGGGATTATAG 1404 0.433 MGWRYKAGLFLIATVVIIWVTSAEVTQDIFIDYKQPFAVTYLGASLMVVYLPIAFIKDWFYNLLKHRSSKSGKDTESGDVFSVKSSSPLKGNGVQKKIEVELGGLVKKDSDLDISTLAEVQPLVAKYNDTNVLKIEEELTTKEIATYGFYIAPIWFITEYLSNAALARTSVASTTVLSSTSGLFTLFIGVLMGQDSLNIAKVVAVLVSMAGVAMTTLGKTWAADDSQISASGNELCLSGRGRVFDPLVNPVGEVHTILLLVQRELGYRSGPCSRVALFCDYPPPPNFPNAGSELPKGMFLIFVFSNGQRSLVGDLFGLLSAVSYGLFTVLLKKFSGEEGERVDVQKLFGYIGLFTLVALWWLIWPLSALGIEPKFTIPHSARVDEVVLANGFIGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMLADMVIHGRHYSALYILGSAQVFAGFVIANISDWMTKKLGL. 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03164 467 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 3 464 - -
Seca8g03164 467 SUPERFAMILY Multidrug resistance efflux transporter EmrE 143 219 - -
Seca8g03164 467 Pfam EamA-like transporter family 137 216 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03164 Seca-Chr8 90105053 90111682 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03164 K15289 - gmx:100792013 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01021 4 16310587 16321942 Seca8g03164 8 90105053 90111682 PCT