Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01021 ATGGGTTGGAAATACAAGGCTGGATTGTTCCTCATAGCCGCTGTCGTTATTATTTGGGTCACTTCCGCCGAAGTTACCCAGGGCATTTTTACAGATTATAAGCAGCCATTTGCAGTGACATATCTTGGAGCTTCTCTCATGGTAGTGTACCTCCCAATAGCATTCATTAAGGACTGGTTCCATAACTTACTTAAACGCCAATCTTCTAAAAGTGGTAAAAATGCACAGTGCGTGGATGAGTTTTCTGTTAGGATTAGCTGTCCTCTCAAAGGCAATGGACTGCAGGAAGACTTTGAACTGGAACTGGGGAGTGTGATTCGAAAAGATAGTGATTTAGACCTTTCAACCCTTGCAGAAGTAAAGCCATTGGTGGCTAAATATAATGACGATACTAATGTGCTAAAGGCAGAGAAGGAACTTACTAGCAAGGATATTGCTACTTATGGATTTTACATTGCACCTATCTGGTTTATAACAGAGTATCTATCAAATGCTGCCCTTGCACGAACAAGTGTTGCAAGTACAACAGTATTATCATCTACTTCAGGACTTTTCACTCTTTTCATCGGTGCATTTATGGGTCAAGACTCTTTAAATGTAGCAAAAGTAGCTGCTGTCCTAGTCAGCATGGCTGGGGTTGTCATGACAACAATGGGGAAAACTTGGGCTACTGATGAATCACAATTAAGTGCTGTTAATGGAAAACGCTCTTTTGTTGGGGATCTTTTTGGACTTTTATCGGCTATGACTTATGGTCTATTTACAGTTCTCCTCAAAAAGTTTTCTGGTGAAGAAGGAGAAAGGGTTGATGTGCAAAAGCTGTTTGGCTATATTGGATTGTTTACATTAGTAGCGCTATGGTGGCTTGTCTGGCCATTGATGGCCTTAGGAATTGAACCAAAATTCACCATTCCCCACTCTGCTAAAATGGATGAAGTCGTTCTTGCCAATGGATTTATTGGAAGCGTACTGTCAGACTATTTCTGGGCACTTTGTGTTGTGTGGACTACTCCCCTTGTAGCCACTTTGGGTATGTCACTCACCATTCCTCTCGCTATGGTGGCTGACATGATGATCCATGGTCGGCATTATTCAGCAGTATACATTCTTGGCTCAGTTCAGGTATTTGCAGGCTTTGTAATAGCGAATCTCTCAGATTGGTTGACGAAGAAGTTGGGATTGTCTGCCGAAGGTTACACCATCTATGGTCGAGTGAAGATCCCAAGTATGTTCCTTTTATCTGCTTTTGGAACAAAAGATTATATTCTTCCTGGAAAAGTTTCAAACGTCAAAGTCATACTGAACAGTGGTCAAAGAGTTACTTTTGTGAGGCCTGATGGATATTTCTCATTCCACAATGTGCCTGCAGGGACTCATCTAATTGAAGTGGCTGCAATAGGCTATTTCTTTTCTCCGGTACGGGTTGATGTTAGTGCCAGAAACCCTGGCAAAATTCAGGCAGCACTGACAGAAAGTAGGAGAGGGCTTAGTGAGTTTGTCTTAGAGCCATTAAAGGAGGAGCAGTATTATGAGATTAGGGAGCCATTTTCTATTATGTCCATTGTGAAAAGTCCAATGGGTCTGATGGTGGGATTTATGCTGATTGTTGTCTTCCTCATGCCCAAATTAATGGAGAATATGGATCCAGAAGAAATGAGGCGTGCACAAGAAGAAATGAGAAATCAAGGAGTTCCATCTTTAGCCAGCCTGTTACCTGGTGCTGCAAGAAGCAACTAG 1737 0.4203 MGWKYKAGLFLIAAVVIIWVTSAEVTQGIFTDYKQPFAVTYLGASLMVVYLPIAFIKDWFHNLLKRQSSKSGKNAQCVDEFSVRISCPLKGNGLQEDFELELGSVIRKDSDLDLSTLAEVKPLVAKYNDDTNVLKAEKELTSKDIATYGFYIAPIWFITEYLSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDSLNVAKVAAVLVSMAGVVMTTMGKTWATDESQLSAVNGKRSFVGDLFGLLSAMTYGLFTVLLKKFSGEEGERVDVQKLFGYIGLFTLVALWWLVWPLMALGIEPKFTIPHSAKMDEVVLANGFIGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMMIHGRHYSAVYILGSVQVFAGFVIANLSDWLTKKLGLSAEGYTIYGRVKIPSMFLLSAFGTKDYILPGKVSNVKVILNSGQRVTFVRPDGYFSFHNVPAGTHLIEVAAIGYFFSPVRVDVSARNPGKIQAALTESRRGLSEFVLEPLKEEQYYEIREPFSIMSIVKSPMGLMVGFMLIVVFLMPKLMENMDPEEMRRAQEEMRNQGVPSLASLLPGAARSN. 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01021 578 SUPERFAMILY Starch-binding domain-like 396 482 IPR013784 GO:0030246
Seca4g01021 578 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 3 393 - -
Seca4g01021 578 Pfam ER membrane protein complex subunit 7, beta-sandwich domain 427 529 IPR019008 -
Seca4g01021 578 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 220 - -
Seca4g01021 578 Pfam EamA-like transporter family 138 217 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01021 Seca-Chr4 16310587 16321942 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01021 K15289 - gmx:100792013 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01021 4 16310587 16321942 Seca8g03164 8 90105053 90111682 PCT