Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02540 ATGTCTAATGGATTTTTTCTTTTATTCCCAAAAATAATGCAGGTTGATAGTGTTAACAAACCTGGAATTCTGCTGGAAGTTGTGCAAATCCTGACAGATCTAGACTTCATAATAACCAAAGCTTACATATCTTCTGATGGTGGATGGTTTATGGATGTATTTCATGTCACGGATCAGCAAGGAAAGAAGATAACAGACAGCAAAATTATTGACTTCATTGAAAAGGCTCTAGGACCAAAAGGCCAGAGCAAAGAAGGGGTGAAGAGTTGGCCAGGCAAACGGGTTGGTGTGCACTCTGTTGGTGATCATACAGCCATTGAGCTAATTGGTAGGGACCGTCCTGGTCTCTTGTCTGAGATATCAGCTGTCCTTGCCAGCCTCCAATTTAATGTGATTGCAGCTGAAGTTTGGACTCATAACAGGCGAATAGCTTGTGTCCTTCATGTCAATGATGCTACAAACCAAGCTGTGGATGACCCCAAAAAATTATCTATCATGGAGGAGCAGCTCAACCACATCCTACGTGTATGTGAGGATGATGAGAAAGTGGCTCGGACCAACTTCTCCATGGGTTTTACCCATATGGATAGAAGGCTCCATCAAATGTTGTTTGCTGATAGGGATTATGAAAGTGCTGGAATTACAACAACAGATATTGATTGTCCTCCCTCTTTCAGGCCAAAAATCAGAATAGAACGTTGTGAGGAAAAAGGTTACTCAGTGGTTAGTGTGAGATGCAAAGATCGGGCAAAGCTGATGTTTGACATTGTTTGCACTCTCACTGACATGCAGTATGTTGTTTTCCATGCCACAATCTCATCGGAAGGGGCTTATGCATCCCAGGAGTACTTCATCCGGCATATGGATGGATGCACACTTGACACATTGAAGAAGAGAAACAGAAGATCATCATAG 915 0.4251 MSNGFFLLFPKIMQVDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDSKIIDFIEKALGPKGQSKEGVKSWPGKRVGVHSVGDHTAIELIGRDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLHVNDATNQAVDDPKKLSIMEEQLNHILRVCEDDEKVARTNFSMGFTHMDRRLHQMLFADRDYESAGITTTDIDCPPSFRPKIRIERCEEKGYSVVSVRCKDRAKLMFDIVCTLTDMQYVVFHATISSEGAYASQEYFIRHMDGCTLDTLKKRNRRSS. 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02540 304 Coils Coil 293 304 - -
Seca8g02540 304 CDD ACT_ACR_1 12 81 - -
Seca8g02540 304 ProSiteProfiles ACT domain profile. 105 188 IPR002912 -
Seca8g02540 304 Gene3D - 103 189 - -
Seca8g02540 304 Pfam ACT domain 105 153 IPR002912 -
Seca8g02540 304 Pfam ACT domain 15 60 IPR002912 -
Seca8g02540 304 SUPERFAMILY ACT-like 100 178 IPR045865 -
Seca8g02540 304 SUPERFAMILY ACT-like 12 79 IPR045865 -
Seca8g02540 304 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 11 301 IPR040217 -
Seca8g02540 304 ProSiteProfiles ACT domain profile. 12 89 IPR002912 -
Seca8g02540 304 CDD ACT_ACR_3 239 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02540 Seca-Chr8 56891454 56896928 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02540 - - gmx:100789044 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g02540 8 56891454 56896928 Seca8g02540 8 56891454 56896928 ECH
Seca8g02540 8 56891454 56896928 Seca4g02430 4 41538911 41546836 PCT