Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02430 ATGACTACAGTTTGTTGGCCATATTTTGATCCGGAGTATGAGAACTTCAGCAATAGAATCAACCCTCCAAGGGTCTCTGTGGACAATGCCAGTTGCCATGATTGTACATTGATCAAGGTTGATAGTGTTAACAAACCTGGAATTCTGCTGGAAGTAGTGCAAATCTTGACAGACCTTGACTTCATAATTACTAAAGCTTACATATCTTCTGATGGGGGATGGTTTATGGATGTATTTCACGTCACGGATCAGCAAGGAAAAAAGATAACAGATAGCAAAACCATTGACTTCATTGAAAAGGCTCTAGGACCAAAGAGCCAGAGCACAGAAGGGGTGAAGAATTGGCCAGGCAAACGGGTAGGGGTGCATTCTGTTGGTGATCACACAGCCATTGAGCTCATTGGCAGAGACCGCCCTGGTCTCTTGTCTGAGATCTCAGCTGTTCTTGCCAGCCTCCATTTTAATGTGATTGCAGCTGAAGTTTGGACTCATAACAGGCGAATAGCTTGTGTCCTTTATGTCAATGATGCTACAAGACAATCTGTGGATGATCCAAACAGATTATCTCTTGTTGAAGAGCAGCTCAACAACATCTTACGTGGATGTGAGGATGGTGAGAAAGTTGCTAGGACTAGTCTCTCCATGGGTTTCACTCATATGGATAGGAGGCTCCATCAGATGTTATTTGCTGATCGGGATTATGAAAGCTCTGGAGTTACAACAGACATTGAATGTTCCCCCTCTTTCAGGCCAAAAATCACAATAGAATGTTGTGAGGAAAAAGGGTACTCAGTGGTTAGTGTCAGGTGCAAAGATAGGGCAAAACTCATGTTTGACATTGTCTGCACTCTTACTGATATGCAATATGTTGTTTTCCATGCCACAATCTCATCAGATGGACCTTATGCATCCCAGGAGTACTTTATTCGACACATGGATGGATGCACACTTGATACAGAAGGAGAGAAAGAAAGAGTAATCAAATGCATTGAAGCTGCTATTCGAAGAAGAGTAAGCGAGGGTGTGAGCCTTGAGCTGTGTGCAAAGGACAGAGTGGGGTTGCTGTCTGAAGTAACAAGGATTCTACGAGAGAATGGCCTGACAGTTTGTAGGGCAGGTATATCAACCAGAGGGGAACAAGCAATGAATGTGTTCTACGTGAGGGATGCATCTGGGAACCCAGTGGATATGAAGACCATCGATGCACTTCGTAAAGAAATAGGGAAGACAATGATGGTGGATGTAAAGAGGGTACCAACAAATGTCAAAGCACCAGAGACCCGAGGATGGGCTAAAACTAGCTTCTTCTTTGGTAACTTGTTTGAAAGATTCTTGACTTGA 1341 0.4355 MTTVCWPYFDPEYENFSNRINPPRVSVDNASCHDCTLIKVDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKALGPKSQSTEGVKNWPGKRVGVHSVGDHTAIELIGRDRPGLLSEISAVLASLHFNVIAAEVWTHNRRIACVLYVNDATRQSVDDPNRLSLVEEQLNNILRGCEDGEKVARTSLSMGFTHMDRRLHQMLFADRDYESSGVTTDIECSPSFRPKITIECCEEKGYSVVSVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDGPYASQEYFIRHMDGCTLDTEGEKERVIKCIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGISTRGEQAMNVFYVRDASGNPVDMKTIDALRKEIGKTMMVDVKRVPTNVKAPETRGWAKTSFFFGNLFERFLT. 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02430 446 Gene3D - 128 210 - -
Seca4g02430 446 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 6 416 IPR040217 -
Seca4g02430 446 FunFam ACT domain repeat 6 341 418 - -
Seca4g02430 446 CDD ACT_ACR_4 341 412 - -
Seca4g02430 446 ProSiteProfiles ACT domain profile. 130 210 IPR002912 -
Seca4g02430 446 Pfam ACT domain 37 85 IPR002912 -
Seca4g02430 446 Pfam ACT domain 130 199 IPR002912 -
Seca4g02430 446 Gene3D - 338 420 - -
Seca4g02430 446 ProSiteProfiles ACT domain profile. 343 420 IPR002912 -
Seca4g02430 446 SUPERFAMILY ACT-like 32 106 IPR045865 -
Seca4g02430 446 ProSiteProfiles ACT domain profile. 37 114 IPR002912 -
Seca4g02430 446 CDD ACT_ACR_1 35 105 - -
Seca4g02430 446 CDD ACT_ACR_3 263 337 - -
Seca4g02430 446 SUPERFAMILY ACT-like 339 410 IPR045865 -
Seca4g02430 446 SUPERFAMILY ACT-like 125 200 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02430 Seca-Chr4 41538911 41546836 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02430 - - gmx:100789173 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02430 4 41538911 41546836 Seca4g02430 4 41538911 41546836 ECH
Seca8g02540 8 56891454 56896928 Seca4g02430 4 41538911 41546836 PCT