Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02087 ATGAAGACTCGTAGCTCTACCAAAATCTCTGCAAAATGGGTTCCCATTTTCTCTGTTTTTTCCTTCCTTATCGGAATTCTCATCACAAGCAGGATGTGGGAACCACTTGAATCCAAAAGCATGCTTTTGCCAAACCATCGGCATGAACAAGAACTGCCAATGATCTCAGGGGATTGCGCTACAAAAAAGAAGCAGCCTGTGCAGGATAAGGATGTAATGGATGAAGTGTACAAAACCCATGAAGCTATTAAATCTCTAGACAAGCAAGTTTCAATGCTTCAGATGGAACTGGCAGCATCTAGGAGTAAACGAGACCCGGGTATCTCAGAGAATTCAGCTAACACCTTGAGCTCAGGGCTCATCACTGAAGGCTCTTCCAGGAAGAAAGTGTTTATAGTGATTGGCATAAACACTGCTTTCAGCAGCAGGAAACGGCGTGATTCAGTTAGAGAGACATGGATGCCTCAAGGCGAACAACTTCTTCAACTTGAACGTGAGAAGGGAATTGTCATCAGATTCATGATTGGTCATAGTGCAACTTCCAACAGCATTCTAGATCGAGCTATTGATTCAGAAGAAGCCCAGCACAATGACTTCCTTCGCCTGGAACATGTTGAAGGGTATCATGAATTGTCTGCAAAGACAAAAATTTTCTTTTCTACTGCAGTTGCAAAATGGGATGCTGATTTCTATGTTAAGGTGGATGATGATGTCCATGTCAATTTAGGTGTACTGGCAACAACTCTTGCTCGTCATCGTTCAAAACCCAGGGTCTACATCGGATGTATGAAATCTGGACCTGTTCTTTCTCGAAAGTAA 819 0.4286 MKTRSSTKISAKWVPIFSVFSFLIGILITSRMWEPLESKSMLLPNHRHEQELPMISGDCATKKKQPVQDKDVMDEVYKTHEAIKSLDKQVSMLQMELAASRSKRDPGISENSANTLSSGLITEGSSRKKVFIVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGHSATSNSILDRAIDSEEAQHNDFLRLEHVEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGVLATTLARHRSKPRVYIGCMKSGPVLSRK. 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02087 272 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 87 269 IPR002659 GO:0006486|GO:0016020|GO:0016758
Seca8g02087 272 Pfam Domain of unknown function (DUF4094) 10 103 IPR025298 -
Seca8g02087 272 Gene3D - 122 272 - -
Seca8g02087 272 Pfam Galactosyltransferase 144 271 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02087 Seca-Chr8 45155947 45159393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02087 1 272 Glycosyltransferase AT1G77810 66.423 3.78e-122 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02087 K20855 - gmx:100804402 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g02087 8 45155947 45159393 Seca8g02087 8 45155947 45159393 ECH
Seca8g02087 8 45155947 45159393 Seca4g02727 4 46848908 46853362 PCT