Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02727 ATGAAGACTCGCACTTCTTCCAAAATCTCTGCAAAATGGGTTCCCATTTTCTCCGTCTTTTCCTTCATTCTTGGCATGCTCATCACAAGCAGGATGTGGGAGCCACATGAATCAAACGGTCTGATAATTTCTCAGCATCAGCGTGATCAAGAACTGCAAGTGATCTCAGAGGACTGCGCTACCAAAAAGAAGCAGCAGCCTGAGGACAAAATGGACGAATTGTACAAAACCCATGAAGCCATTCAAGCACTAGACAAACAAGTTTCCACGCTGCAAATGGAATTAGCAGCAGCTAGGAGTTCTCGTGAAAACAAGATCTCAGACTCAGATGGTTCAGCCACCACTTCTGGGGAAAACCCTCCCAGGAAGAAGGCATTTATAGTAATAGGCATAAACACAGCTTTCAGTAGCAGGAAGCGGCGTGATTCAGTTAGAGAGACTTGGATGCCTCAAGGGGAAGAACTTCTTCGATTGGAACGGGAGAAGGGAATTGTTATCAGATTCATGATTGGCCACAGTGCAACTTCCAACAGCATTCTAGATCGAGCTATTGATTCAGAAGAAGCCCAGCACAAAGACTTCCTTCGCCTGGAACATGTTGAAGGGTATCATGAGCTGTCTGCAAAGACAAAGATTTTCTTTTCTACTGCAGTTTCACTGTGGGATGCTGATTTCTATGTCAAGGTGGATGATGATGTCCATGTCAATTTAGGTGTCCTGGCAACAACCCTTGCTCGTCATTGTTCAAAACCAAGGGTCTACATTGGGTGTATGAAATCTGGACCTGTCCTTTCTCGAAAGGATGTCAAGTACCATGAACCTGAGTTTTGGAAGTTTGGAGAAGAGGGGAACAAATACTTCCGACATGCAACTGGGCAGATATATGCAATCTCTAAGGATTTAGCCACTTACATTTCCATCAACCAGCCAATTTTGCATAAATATGCTAATGAAGATGTCTCACTTGGTTCCTGGTTCATTGGTCTTGAAGTTGAGCATATTGATGACCGCAGTATGTGCTGTGGAACTCCTCCAGGTATATAA 1044 0.4406 MKTRTSSKISAKWVPIFSVFSFILGMLITSRMWEPHESNGLIISQHQRDQELQVISEDCATKKKQQPEDKMDELYKTHEAIQALDKQVSTLQMELAAARSSRENKISDSDGSATTSGENPPRKKAFIVIGINTAFSSRKRRDSVRETWMPQGEELLRLEREKGIVIRFMIGHSATSNSILDRAIDSEEAQHKDFLRLEHVEGYHELSAKTKIFFSTAVSLWDADFYVKVDDDVHVNLGVLATTLARHCSKPRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKYANEDVSLGSWFIGLEVEHIDDRSMCCGTPPGI. 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02727 347 Coils Coil 81 101 - -
Seca4g02727 347 Gene3D - 114 340 - -
Seca4g02727 347 Pfam Galactosyltransferase 139 336 IPR002659 GO:0006486|GO:0016020|GO:0016758
Seca4g02727 347 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 85 333 IPR002659 GO:0006486|GO:0016020|GO:0016758
Seca4g02727 347 MobiDBLite consensus disorder prediction 99 122 - -
Seca4g02727 347 Pfam Domain of unknown function (DUF4094) 10 101 IPR025298 -
Seca4g02727 347 FunFam Hexosyltransferase 119 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02727 Seca-Chr4 46848908 46853362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02727 1 345 Glycosyltransferase AT1G77810 74.713 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02727 K20855 - gmx:100776715 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02727 4 46848908 46853362 Seca4g02727 4 46848908 46853362 ECH
Seca8g02087 8 45155947 45159393 Seca4g02727 4 46848908 46853362 PCT