Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02043 ATGTTGCTAGGAAAGAGACCTCGTGCTCCAATGAAGAGAACCACAAGCCTATCAGAGATAACCTTGGATCTGAACACCACTGTCGATGTTGATGCAAGTGGTGACCCTCTGAACAACCGCCAGAGATCTAGTGGAGTTGGTGTTGTTGGGTTCAATAATGGGTTAGATCAGAACAGGGTGGTTCCACCCAGAAACCAAAGAAGACATTCTTCTTCTGATTTCGTTGAAACCTCTGATTTCTTGCGTGTTTGCTCTCTCTGCAAACGCCGTCTCATACCAGGCCGTGACATCTACATGTACAGAGGTGATAGTGCGTTTTGCAGCCTGGAGTGTCGTCAACAGCAAATGAATCAGGATGAGAGAAAAGAGAAGGTTTTTATGGCATCAAAGAAACAAGTTGTGGCACCTTCTTCTGGGTCTCAAGTAACTGCAGCAACCACCAAAGGCGAAACAACCGTGGCTGCTTTGTAG 471 0.465 MLLGKRPRAPMKRTTSLSEITLDLNTTVDVDASGDPLNNRQRSSGVGVVGFNNGLDQNRVVPPRNQRRHSSSDFVETSDFLRVCSLCKRRLIPGRDIYMYRGDSAFCSLECRQQQMNQDERKEKVFMASKKQVVAPSSGSQVTAATTKGETTVAAL. 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02043 156 PANTHER FCS-LIKE ZINC FINGER 5 1 148 - -
Seca8g02043 156 ProSiteProfiles Zinc finger FLZ-type profile. 79 123 IPR007650 -
Seca8g02043 156 Pfam zinc-finger of the FCS-type, C2-C2 72 122 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02043 Seca-Chr8 43694729 43695379 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02043 - - gmx:100527853 181.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g02043 8 43694729 43695379 Seca8g02043 8 43694729 43695379 ECH
Seca8g02043 8 43694729 43695379 Seca4g02771 4 47742635 47743773 PCT