Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02771 ATGCTGTTAGGGAAGAGGCCTCGTCCTCCAATAAAGAGAACCACAAGCTTGTCAGAGATAACCTTCGATCTGAACACAGCCATGGATGAAGATCCCTTCAACAACCGTCATGGACCGGGAGGAGCTGTGGTTGGACCATGTCCACGGTCGAACCGGCCACCAGGTGGATTCAACGGTTCAGATCAGAGCAGGATTTTGGCCACAGTTTCACCCAGAAATTCTTCCGATTTGACATTGGCACACACCCCTGACTTCTTGCGTGTTTGTTTTCTCTGCAAACGCCGTTTGGTACCTGGCCGTGACATCTACATGTACAGAGGTGATAGTGCTTTCTGCAGTCTAGAATGCCGTCAACAGCAGATGAACCAGGATGAGAGAAAGGATAAGCGTTGTGTGGCATCAAAGAAACAAGTTGTGGCTCCGCCTTCTGGGTCGACTCCTCAAGTCACCACCACAAAGTCTTAA 465 0.4989 MLLGKRPRPPIKRTTSLSEITFDLNTAMDEDPFNNRHGPGGAVVGPCPRSNRPPGGFNGSDQSRILATVSPRNSSDLTLAHTPDFLRVCFLCKRRLVPGRDIYMYRGDSAFCSLECRQQQMNQDERKDKRCVASKKQVVAPPSGSTPQVTTTKS. 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02771 154 Pfam zinc-finger of the FCS-type, C2-C2 80 127 IPR007650 -
Seca4g02771 154 MobiDBLite consensus disorder prediction 39 63 - -
Seca4g02771 154 PANTHER FCS-LIKE ZINC FINGER 5 1 138 - -
Seca4g02771 154 MobiDBLite consensus disorder prediction 123 154 - -
Seca4g02771 154 ProSiteProfiles Zinc finger FLZ-type profile. 84 128 IPR007650 -
Seca4g02771 154 MobiDBLite consensus disorder prediction 139 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02771 Seca-Chr4 47742635 47743773 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02771 - - cam:101511560 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02771 4 47742635 47743773 Seca4g02771 4 47742635 47743773 ECH
Seca8g02043 8 43694729 43695379 Seca4g02771 4 47742635 47743773 PCT